Clone Read LE_HBa0233N10_SP6_391307

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233N10_SP6_391307
Primer
SP6
ID from Seq. Facility
LE_HBa_233_N10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
693 trimmed for vector and quality, 945 raw
Sequence
>LE_HBa0233N10_SP6_391307 (raw untrimmed)
NNGGTAGTTCTCTAATTTCCATACCATTCTCAAATGCTCTTCATGTTCCTTCTTACTCTTTGAGTATACTACTTTATCATCAATAAATACGATCACGAAG
AGGTCCAAATATCTTTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTTAGACCAAAAGACATCACTACAAATTCGTAATGTCCAT
ACCTCATTCGAAAAATAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTG
TAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCA
TCCTTCTTCTTTACAAAAAAACCGAAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAAATCTCT
TAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCCGATGGCATACCA
GGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACCACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAG
CTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAAGAGACGATGCCGACCGGAATGGAAATGTAGTCACCCTCCCAAACTAACGGATTTGTCCC
AGGCTTGGCTAACGTTACCGGTTTAAGCATTACAATCCAAAATCCCAAATTTGTGGAAAAAGCCCAAGTCATACCCCGAAATTACCTTCAAAATCCATCC
CATTTTCTGAAGAAAACCAAAATCTACCTTAAGTGGTTGCCTCCA
>LE_HBa0233N10_SP6_391307 (trimmed for quality and cloning vector)
ATACCATTCTCAAATGCTCTTCATGTTCCTTCTTACTCTTTGAGTATACTACTTTATCATCAATAAATACGATCACGAAGAGGTCCAAATATCTTTTAAA
AATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTTAGACCAAAAGACATCACTACAAATTCGTAATGTCCATACCTCATTCGAAAAATAGTC
TTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCAT
CAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAAAAA
ACCGAAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAAATCTCTTAACTCTGCGGGAGCCATTC
TATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCCGATGGCATACCAGGAAGATCTGCAGGGAACAC
ATCCAGAAACTCACGAACCACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.982458
Expected error %
0.356861
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233N10
Clone
Clone name
hba-233n10
LE_HBa0233N10
P233N10
Clone type
BAC
Contamination
none
Estimated length
98,829
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found