Clone Read LE_HBa0216M17_SP6_391458

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0216M17_SP6_391458
Primer
SP6
ID from Seq. Facility
LE_HBa_216_M17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
835 trimmed for vector and quality, 995 raw
Sequence
>LE_HBa0216M17_SP6_391458 (raw untrimmed)
NNNGGCTGTGGATTGGGGAGGCCTGAACACCTTGGGAATCGACGAGCTTCTGGGGGTTTTTCTTCCCCTATACAAAATAGCAACAACTTCTTCTCTTTTC
TTTTTCACCTACCCTAAAGATCCAGGTGATGCGGCTACACGGGCTATATTCCCTGATTTCAAACCGTCTTCGATAGTCTCACCGATCTTGACTATCTCGG
CAAACTTTGCTTCAACGAGCAACATGATTCTATCGTAGTATTCTGGCTCTTGCACCCGCACAAACACTTTAACGATCTCTTTCTCGGTCATGGGCAGCCT
TACCCTTGCTGCTTCTTTCCTCCACCTATAGGCGAACTCTTTATAGCTTTCAGTTGGCTTTTGCTTCATCTTTTCTAGAAAATACGGATCGGGAACTATT
TCAATATTGTAGGCAAATCGATCGATGAAATGTTTGGCCAATGAATTCCAAGTGGGCCATTGCCTGGTTTTATGTGAGGTAAACCATTTGAGGGCCTCCC
CACACAGGCTTCGGCTGATAATCCGCATCAACAAAGCCTCATCCCTGCCAATTCCGACGAGCTGGTCACAATAGGCTCTCAAATGATCCATGGGGTTGCC
CACTCCTCCGAAGGTGTCAAACTTTGGAATCTTGAACCCTTCTGGAAGGTCCAAATCTGGGTGGATACACAAGTCCTCGTAACTGAGTCCAGCGATGTCG
GGGATGCACTGTATCTCTTTCATGGACTTTTTGATTTCCTCTTTTATATCGATATTTGCATCCTCCTTTTTCCTCCATTCCTTTTCATGTTCTTCATAGT
GGTCCAACTCAGAACCGTGCACATCGTGCTCGGTAGGAACGGGAACTTGTAAAGTGTCTCTCTTTGGTAGGGGTGGAGCTATAGAGGGACTTGGAACGTT
TTGGGCGGTTGGGTAATCTGTGGGTAGGCCTGAAGATTGATGTCTGAATTAAAGGGGAAAAGGGGTTTTAGAAATAAAAAATTTTTTTCTTGTTT
>LE_HBa0216M17_SP6_391458 (trimmed for quality and cloning vector)
CGACGAGCTTCTGGGGGTTTTTCTTCCCCTATACAAAATAGCAACAACTTCTTCTCTTTTCTTTTTCACCTACCCTAAAGATCCAGGTGATGCGGCTACA
CGGGCTATATTCCCTGATTTCAAACCGTCTTCGATAGTCTCACCGATCTTGACTATCTCGGCAAACTTTGCTTCAACGAGCAACATGATTCTATCGTAGT
ATTCTGGCTCTTGCACCCGCACAAACACTTTAACGATCTCTTTCTCGGTCATGGGCAGCCTTACCCTTGCTGCTTCTTTCCTCCACCTATAGGCGAACTC
TTTATAGCTTTCAGTTGGCTTTTGCTTCATCTTTTCTAGAAAATACGGATCGGGAACTATTTCAATATTGTAGGCAAATCGATCGATGAAATGTTTGGCC
AATGAATTCCAAGTGGGCCATTGCCTGGTTTTATGTGAGGTAAACCATTTGAGGGCCTCCCCACACAGGCTTCGGCTGATAATCCGCATCAACAAAGCCT
CATCCCTGCCAATTCCGACGAGCTGGTCACAATAGGCTCTCAAATGATCCATGGGGTTGCCCACTCCTCCGAAGGTGTCAAACTTTGGAATCTTGAACCC
TTCTGGAAGGTCCAAATCTGGGTGGATACACAAGTCCTCGTAACTGAGTCCAGCGATGTCGGGGATGCACTGTATCTCTTTCATGGACTTTTTGATTTCC
TCTTTTATATCGATATTTGCATCCTCCTTTTTCCTCCATTCCTTTTCATGTTCTTCATAGTGGTCCAACTCAGAACCGTGCACATCGTGCTCGGTAGGAA
CGGGAACTTGTAAAGTGTCTCTCTTTGGTAGGGGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973035
Expected error %
0.371851
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0216M17
Clone
Clone name
hba-216m17
LE_HBa0216M17
P216M17
Clone type
BAC
Contamination
none
Estimated length
62,311
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found