Clone Read LE_HBa0234E08_SP6_391995

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234E08_SP6_391995
Primer
SP6
ID from Seq. Facility
LE_HBa_234_E08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
645 trimmed for vector and quality, 1012 raw
Sequence
>LE_HBa0234E08_SP6_391995 (raw untrimmed)
CGGACCGCTGGGGNNNNNNNNTAAAATGGANATTTTTCTTANTCAGTTCGTCAGTTGGGAAGCAATAGAAGAGAATCCCTTGACAAATCGGCGGTAGTAA
CTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCGATCTTAGAAGGATCCACCATCACTCCATCCT
TAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAAAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCAT
TCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATGAGTATGTCATCAATAAATACAATCACAAAGAGATTCAAATATGGCTTAAAAATCCCG
TTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACTAAAATACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGTAGTCTTTGGCA
CATCCGTTGCCCGTATTTTTAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACGAGCACCTTGTAACTAATCGAACAAGTCATCAATGCG
AGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGGACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACGGGA
GCACCCCGAGGATATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGGTGGGGTTTTAATTCTCTTAACTCCGGGGAATCCATTCTATAAG
GGGGGTAAAAAAATGGGGCGAAAGGCCCGGTTCAAGAATCATTACAAAAGTCAATATCCCCTATCGGGGGGCATACCAGGAAGATCTGCAGGGAAACCTT
CCCAAAAACTTCCGGAACCACGAAACCGAACTCAATCGAAGGGAACTGTGGGGAGGGCCAATCCTGGGAAATTGCCCAAGAAACTCAAACACCCCTTTTC
CTAACCAATTGT
>LE_HBa0234E08_SP6_391995 (trimmed for quality and cloning vector)
ATTTTTCTTANTCAGTTCGTCAGTTGGGAAGCAATAGAAGAGAATCCCTTGACAAATCGGCGGTAGTAACTAGCTAACCCAACAAAGCTCCTTATTTCTG
ACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCGATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGC
ATCTAGCCAAAACTCACACTTAGAAAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTT
TTAGAGTATATGAGTATGTCATCAATAAATACAATCACAAAGAGATTCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCAT
TCGTAAGACTAAAATACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGTAGTCTTTGGCACATCCGTTGCCCGTATTTTTAATTGATGATA
ACCGGATCTCAAGTCAATCTTAGAGAAGACACGAGCACCTTGTAACTAATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACC
TTGTTCAACTGCCGGTAGTCTATGGACATCCGAAAACTCCCATCC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.980483
Expected error %
0.619438
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234E08
Clone
Clone name
hba-234e8
LE_HBa0234E08
P234E08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found