Clone Read LE_HBa0234I04_SP6_392375

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234I04_SP6_392375
Primer
SP6
ID from Seq. Facility
LE_HBa_234_I04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
688 trimmed for vector and quality, 994 raw
Sequence
>LE_HBa0234I04_SP6_392375 (raw untrimmed)
GCCTNNAGCTGATGCANTGGNCATCCCATAGCTAACCAGACAAATTGAATACCCAGTAATGTTAGCAAACCCAATTGCAAGAGATCCACCAGCAAGAGCC
AAACCCCCAAGACGGCCAAGAAACAGCATAGAGATCATAGAACGAGAGTAAAGCAAAAGTCCTGTAAGGATCATTGGAAAAGCGATATTAGCTATGGATT
TAGCTTCATTGAATACAAGAGAAGTTATTTTCTTGTTGGTTATGTGGGGGTAAGTGTCGTTTGTTGGGCTTTTAGTTATCAAAGGGGTAGACATGTCGGA
TTCTTCAGGGACTTTAATGGTGGTGAAATTTTTTTCTGCATATGCTTCGCATTTGCAGGTGAATGGCGGACTTGTCGGCTTACACATTTTTTTTTTCTGT
TAATATAATTAAAAGAGAAAGCAAAGAGATAATAGAGTTTTATAACGAACGAGGAAGAAGTTTTTGTGCACATTTAAAGGCCAACAAGTGATGGGGTTTA
TATAAGGACAGATTTTCGAAACTTTTACCAGCCTACAACATTATAAACAGTGGAATGCCAATTTTGTTTCAACTAAGTTTTTAGGGGCGGAACCTTTTTT
ATTTATTTGGCATATTTGTCCTTTTTAACACAAATGTTCAACTTTCTATAAAAAATTTCAATAAATTATACAAACTTATTTTATGACGACTAGTTCTGTT
ATAGTAGTATACTAACGCACGAGTGTGTTGTAGAATTATCTAACAGGGAAGCCAAAAACTGCAAAGAGATGATAGACAAGTCATAAGCAGAGACCATTGA
TGAAACAACTTTTTGGACATATAGATTAGGAACCCAAAACCGGCCATAAATAAAAAAGGCCCGTTTAAGGGGCCCAAAAAAACTTGTACTGTTCCTTAGA
AGCGGAAATTTTAAAGGTAAATTACGGTGGCACCTATATTCCAAAAAATCCAAAACCCCATCCCGGGGAATTAAGACCAAAGGGATCCATTGGN
>LE_HBa0234I04_SP6_392375 (trimmed for quality and cloning vector)
AACCAGACAAATTGAATACCCAGTAATGTTAGCAAACCCAATTGCAAGAGATCCACCAGCAAGAGCCAAACCCCCAAGACGGCCAAGAAACAGCATAGAG
ATCATAGAACGAGAGTAAAGCAAAAGTCCTGTAAGGATCATTGGAAAAGCGATATTAGCTATGGATTTAGCTTCATTGAATACAAGAGAAGTTATTTTCT
TGTTGGTTATGTGGGGGTAAGTGTCGTTTGTTGGGCTTTTAGTTATCAAAGGGGTAGACATGTCGGATTCTTCAGGGACTTTAATGGTGGTGAAATTTTT
TTCTGCATATGCTTCGCATTTGCAGGTGAATGGCGGACTTGTCGGCTTACACATTTTTTTTTTCTGTTAATATAATTAAAAGAGAAAGCAAAGAGATAAT
AGAGTTTTATAACGAACGAGGAAGAAGTTTTTGTGCACATTTAAAGGCCAACAAGTGATGGGGTTTATATAAGGACAGATTTTCGAAACTTTTACCAGCC
TACAACATTATAAACAGTGGAATGCCAATTTTGTTTCAACTAAGTTTTTAGGGGCGGAACCTTTTTTATTTATTTGGCATATTTGTCCTTTTTAACACAA
ATGTTCAACTTTCTATAAAAAATTTCAATAAATTATACAAACTTATTTTATGACGACTAGTTCTGTTATAGTAGTATACTAACGCACG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949061
Expected error %
0.0925455
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234I04
Clone
Clone name
hba-234i4
LE_HBa0234I04
P234I04
Clone type
BAC
Contamination
none
Estimated length
89,237
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found