Clone Read LE_HBa0234J18_SP6_392526

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234J18_SP6_392526
Primer
SP6
ID from Seq. Facility
LE_HBa_234_J18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
662 trimmed for vector and quality, 994 raw
Sequence
>LE_HBa0234J18_SP6_392526 (raw untrimmed)
CTTTGCTGTGTCTTTAATGTTGCCTTTCTGGTCTTTAGGCCCTGTCATAACCTTCATGACATCTACTGATTCAAATGTGATACTAAAGGGAGCAGTTGCA
TCTACCGTTATATTCTTCAGTGCTTCTACTACCGCTGCGCTTCACTGGTTTGTGAGTCCTTATATTCACAAACTGAGATGGAAGCCAGGTTCAGATTCTT
TTGAAGTGGAGATGATGTCTTGGCTTGCAACTTTTATGCCGAAGACGATTAAGTTTGCAGATATCAAGCATCCTGACACCAATAGACCTTATGTAACATT
CAAGGCTAACGGAAACTTTTATTTTGTTGATGCGGAGCATTGTCCGAACAAGGCGCTATTGGCAAAACTTACCCCACAGAAACCTACTCATGAGTCAGCT
TTCAAGAACTTGTGATGACAACTTTTTATCTGGAATAATTTGAGATTTGAAGGTTTTGTATTGCATTGCTCACTAGAAGTTCCAATACTTGAGTCTTGGA
TATATATAAGCCTCAGTTGGTTGTCAATTTTTCAATTATTATAACATTGATTGTCTTATCTCTCTCTTCTTCTTTTTTTTTTTAAAAAGAAAATAATAGT
AATGTCTAGACCAGCTTGGCAGGTCATTTCTTCCATCTGCATGAGTTTTGGTGGTATACTAACCTTGATATTTGTGTTGATGTAAGGTGGTAGGTATCCA
ACAAAATAACGAAGGTCATGTGTACAAGTTGGTCTTCCATCTGTCTAAATGTTAGGGTTGGATGAACCCTACAACCCTGGTGGGAAATAATATTGTATTC
AGTAGGACAATCAATTATGATGACCAGAGGTGGTAGGCATCTAAATGAATGAATAATAATGCTTCAAAATGATTCTAACACCCCCATTCCTATATAAGCC
CTTGCCGTCTATACTTTTTTAAAAATTATTAAAAAAGTGTTGTTCCAACCCAATTTTTATGGGGCCCCCCCCAACCCTTAGGGGCCAAAATATG
>LE_HBa0234J18_SP6_392526 (trimmed for quality and cloning vector)
GTCTTTAGGCCCTGTCATAACCTTCATGACATCTACTGATTCAAATGTGATACTAAAGGGAGCAGTTGCATCTACCGTTATATTCTTCAGTGCTTCTACT
ACCGCTGCGCTTCACTGGTTTGTGAGTCCTTATATTCACAAACTGAGATGGAAGCCAGGTTCAGATTCTTTTGAAGTGGAGATGATGTCTTGGCTTGCAA
CTTTTATGCCGAAGACGATTAAGTTTGCAGATATCAAGCATCCTGACACCAATAGACCTTATGTAACATTCAAGGCTAACGGAAACTTTTATTTTGTTGA
TGCGGAGCATTGTCCGAACAAGGCGCTATTGGCAAAACTTACCCCACAGAAACCTACTCATGAGTCAGCTTTCAAGAACTTGTGATGACAACTTTTTATC
TGGAATAATTTGAGATTTGAAGGTTTTGTATTGCATTGCTCACTAGAAGTTCCAATACTTGAGTCTTGGATATATATAAGCCTCAGTTGGTTGTCAATTT
TTCAATTATTATAACATTGATTGTCTTATCTCTCTCTTCTTCTTTTTTTTTTTAAAAAGAAAATAATAGTAATGTCTAGACCAGCTTGGCAGGTCATTTC
TTCCATCTGCATGAGTTTTGGTGGTATACTAACCTTGATATTTGTGTTGATGTAAGGTGGTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955079
Expected error %
0.022143
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234J18
Clone
Clone name
hba-234j18
LE_HBa0234J18
P234J18
Clone type
BAC
Contamination
none
Estimated length
106,765
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found