Clone Read LE_HBa0234K09_T7_392590

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234K09_T7_392590
Primer
T7
ID from Seq. Facility
LE_HBa_234_K09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
667 trimmed for vector and quality, 949 raw
Sequence
>LE_HBa0234K09_T7_392590 (raw untrimmed)
GCAGGCTGCAAGCTTTCGCATTTACACCTAGTTACTTTCGATCCTAACAAGTGGTATCAGAGCCAGATTCAATGATGGAGTCGAGTTTAATGGTTCGATA
ATCGATGATTGATCCAGGTTAGAAGGAGATGTTCATTTTGGCGGGTGTAGTTCTAGCCGCAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTA
TTTCAGGGAGGTTCTCTGTGTTGAGACATAAATTTTTCAAAGGAGATTATAGAGAGGAGAAACAAGTTGTCGAAGATTAAGTGAAGAAGGTGGACAAATT
TGTTTTGTCAGAAATTCAGGCCAAGTGGGAGATTTTTAGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTTTTAAAAAAGGTTTTGGAT
TGATTAATCCTTTCTTTGGTAGGAAAAGGTTTAGGACTCTATAAATAAAGACATGTTCCTTCTAACTTAAACAGTATTCACAATGTAGTCTTAAGGGATT
TGAGAGTTTGGGTTAGGGGGAAAATTTGTGGATCACAAGCTAGATACGTTATCACTTGTGTGAACCTCCCATGTATTCTGAGTGAATTAGTTGAGGTTGT
TTCTCTCTGTATTTTGTACTCTCATATTTATAGTGGATTGATCATCTTCTTTGTGGATGTAGGTCGATTGACCAAACCACGTTAAATCTTTGTGTCTTTT
GAAATGTTTCCTGTTGGCTTCTTACTCGTGATCTTTTGAGTTTTTCTTTGCTAGCTTACCCCATTACCCCTATTTCGTGTTTCCTCCCCCGGGGGGGGGA
GTCCGTGGGTAGTTTTAAAAAGGTAATATAGGCCCTTGTTTGGTGAAAATTTGGGGGGGGAACCAACCCTTTTGTAAAAATTTTGGTTATCCTGGGAAAA
GGGAATGATTTGTGATGGAAAATCTGGGGGTAGGAACCTTGGCCCTTTN
>LE_HBa0234K09_T7_392590 (trimmed for quality and cloning vector)
GCAAGCTTTCGCATTTACACCTAGTTACTTTCGATCCTAACAAGTGGTATCAGAGCCAGATTCAATGATGGAGTCGAGTTTAATGGTTCGATAATCGATG
ATTGATCCAGGTTAGAAGGAGATGTTCATTTTGGCGGGTGTAGTTCTAGCCGCAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTATTTCAGG
GAGGTTCTCTGTGTTGAGACATAAATTTTTCAAAGGAGATTATAGAGAGGAGAAACAAGTTGTCGAAGATTAAGTGAAGAAGGTGGACAAATTTGTTTTG
TCAGAAATTCAGGCCAAGTGGGAGATTTTTAGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTTTTAAAAAAGGTTTTGGATTGATTAA
TCCTTTCTTTGGTAGGAAAAGGTTTAGGACTCTATAAATAAAGACATGTTCCTTCTAACTTAAACAGTATTCACAATGTAGTCTTAAGGGATTTGAGAGT
TTGGGTTAGGGGGAAAATTTGTGGATCACAAGCTAGATACGTTATCACTTGTGTGAACCTCCCATGTATTCTGAGTGAATTAGTTGAGGTTGTTTCTCTC
TGTATTTTGTACTCTCATATTTATAGTGGATTGATCATCTTCTTTGTGGATGTAGGTCGATTGACCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949454
Expected error %
0.0877609
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234K09
Clone
Clone name
hba-234k9
LE_HBa0234K09
C08HBa0234K09
P234K09
Clone type
BAC
Contamination
none
Estimated length
43,866
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found