Clone Read LE_HBa0234L07_SP6_392684

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234L07_SP6_392684
Primer
SP6
ID from Seq. Facility
LE_HBa_234_L07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 1026 raw
Sequence
>LE_HBa0234L07_SP6_392684 (raw untrimmed)
CCCCCGCGATCGGAANNNNNNTTTNNNTNNNNAATNNCTAAANGNCANTACCCCAAGGTCTAACCTCGAATGCATCAAACCAACCAATGGGAGACCTACA
TCTCCTACCATACAACGCTTCAAATGGTGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGA
CCACCATACTCTATCACACATGCACGAAGCATATCCTCCAACAATTGAATCGTCCTTTCAGACTGACCATCGGTCTGAGGATGGAACGCAGTACTAAGGT
CCAACCTAGTACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCCCTATCTGATATGATGGATAGTGGAACCCCATGCAATCG
AACGATTTCTGAGATATAGATCTTGGCTAAATTATGAAATGAGCAAATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACCTACCCATCGTTT
TTGGAAGACCAACCACGAAGTCCATTGCAATTCTCTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGCGTTCCTCTGGGCCTTTGGTGTTCATACTT
TAATTACTGACAGTTTGGACACTTGGCAATAAAGTCAGCAATATCACGCTTAATTCTACTCCACCCAAAGTGTTGTTTTAGGTCACGATACATCTTGGTT
GCTCCCGGATGTATTGAATACCTCGAACTATGACCTTCTGTCAAATTAGTGTTGATCAAATCATCCACATGGGGGCACATATACCCCCCCCCTTGATTCT
CAAAACACCCTTCCTCATCGAATTTGGGCTTCCTTAACCCTCTTCCCCACATACCCTTAATCTTGGATTCCTCCTAAGTTTCCTCACCATCAAATTGGTT
TTCCCCTTAATTTTTTCTCAAGAAAAAAAAGATCTTTAACTTCCCAAAAAGCCCAAAAAACCCCCCCTTTCCCAATTACTTTTAAACCCCAATCAAGATC
TTTTACTTAAAATCTTAAACCCTCCG
>LE_HBa0234L07_SP6_392684 (trimmed for quality and cloning vector)
TACCCCAAGGTCTAACCTCGAATGCATCAAACCAACCAATGGGAGACCTACATCTCCTACCATACAACGCTTCAAATGGTGCCATATCAATGCTTGAGTG
ATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGACCACCATACTCTATCACACATGCACGAAGCATATCCTCCAACAATTGA
ATCGTCCTTTCAGACTGACCATCGGTCTGAGGATGGAACGCAGTACTAAGGTCCAACCTAGTACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAG
TAAACTGCGTACCCCTATCTGATATGATGGATAGTGGAACCCCATGCAATCGAACGATTTCTGAGATATAGATCTTGGCTAAATTATGAAATGAGCAAAT
TTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACCTACCCATCGTTTTTGGAAGACCAACCACGAAGTCCATTGCAATTCTCTCCCACTTCCATT
CCGGAATGGGCATTCTCTGAAGCGTTCCTCTGGGCCTTTGGTGTTCATACTTTAATTACTGACAGTTTGGACACTTGGCAATAAAGTCAGCAATATCACG
CTTAATTCTACTCCACCCAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.977134
Expected error %
0.231503
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234L07
Clone
Clone name
hba-234l7
LE_HBa0234L07
P234L07
Clone type
BAC
Contamination
none
Estimated length
135,339
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found