Clone Read LE_HBa0217C01_SP6_392693

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217C01_SP6_392693
Primer
SP6
ID from Seq. Facility
LE_HBa_217_C01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
743 trimmed for vector and quality, 944 raw
Sequence
>LE_HBa0217C01_SP6_392693 (raw untrimmed)
NNNNNCCAGATGGGATAGTTGTCTGAACCCTACACCGAATGAAGGTGGACTACTTGCCAAGGTAGTACCCAATCATGAACATATCATTCTAGGTGGATCT
ATTGGCTAGTATTTCTATAGAGGCAACATAGTTCAAGTACTAGGAGAGATACTTGAGCCCTACTTATGCACAATTGCATTGTAATCACTATCTCATCAGA
ACCATTGTGAACCTACCTTCCCACATTGGGAAAGGACACCTCTAATAATTAGTTCCCTCGGTGCTAAGCTAAAGTCCCTTTTTAAAATGTCTTTAAGCCT
TTTTGAATCATCATAGCATAGTATAGGTTATAGGAGACTAACCCCTTGTATATCATAATCATTAGCTTATTAGGAATTGCCTGGGAACTTCTTTTTGATA
CAACCCTCATATGTGAGATTAAAACATTATCATCATCATGTCATAGTAAGACACATAAGTAATTCACAATCAACTTTATAGCATTATACCTTAATCATAA
TCTCACAATCGATATATTCAAGACATTTCAATTACATTCATCATACCATCACCTATCTAATCTAATCACAATTAACACTTCAATTGAACATCATAATCAA
GTATAAGCCATCACAATTGAAGTAAGAATTCGAGATCATAGGTCTGGCCAATTCACCTTCACAAGCCTTTTTCCATGGTCTTACCATCAACCAACCATAT
TTACCCATAAATAGACTTAATAACATCATACAATTGTAATTACCAAAAGAACTAAGTCAATTGCATCATAACTAACCAATTCATCATCAACTCATAACTT
AGGGTTAGGGAAAATAGGTCAATTCATGATATCTTCCATAGAACTAGGTTCAACATCAACAACTACCCTATATATATATATATATATAAAATCAAAGAAA
ATAAGGAAAATACAATTTTAAGCATTATTTTCGTATAAGAATGA
>LE_HBa0217C01_SP6_392693 (trimmed for quality and cloning vector)
CCCTACACCGAATGAAGGTGGACTACTTGCCAAGGTAGTACCCAATCATGAACATATCATTCTAGGTGGATCTATTGGCTAGTATTTCTATAGAGGCAAC
ATAGTTCAAGTACTAGGAGAGATACTTGAGCCCTACTTATGCACAATTGCATTGTAATCACTATCTCATCAGAACCATTGTGAACCTACCTTCCCACATT
GGGAAAGGACACCTCTAATAATTAGTTCCCTCGGTGCTAAGCTAAAGTCCCTTTTTAAAATGTCTTTAAGCCTTTTTGAATCATCATAGCATAGTATAGG
TTATAGGAGACTAACCCCTTGTATATCATAATCATTAGCTTATTAGGAATTGCCTGGGAACTTCTTTTTGATACAACCCTCATATGTGAGATTAAAACAT
TATCATCATCATGTCATAGTAAGACACATAAGTAATTCACAATCAACTTTATAGCATTATACCTTAATCATAATCTCACAATCGATATATTCAAGACATT
TCAATTACATTCATCATACCATCACCTATCTAATCTAATCACAATTAACACTTCAATTGAACATCATAATCAAGTATAAGCCATCACAATTGAAGTAAGA
ATTCGAGATCATAGGTCTGGCCAATTCACCTTCACAAGCCTTTTTCCATGGTCTTACCATCAACCAACCATATTTACCCATAAATAGACTTAATAACATC
ATACAATTGTAATTACCAAAAGAACTAAGTCAATTGCATCATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.940466
Expected error %
0.253695
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217C01
Clone
Clone name
hba-217c1
LE_HBa0217C01
C02HBa0217C01
P217C01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found