Clone Read LE_HBa0217C01_T7_392695

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217C01_T7_392695
Primer
T7
ID from Seq. Facility
LE_HBa_217_C01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
564 trimmed for vector and quality, 963 raw
Sequence
>LE_HBa0217C01_T7_392695 (raw untrimmed)
NNGGACACTGTCCGGGACTCTGAGTGACCTGCAGGCAGCAAGCTTCTTCGCATGCCCTTGGCCACTTTTTTTCATACTCTTTTGGGTTAAGGTAGTAAAA
GGAGAATTAATGGATGCCAAACCATCCAAAAACCTCCTATAGTATCCCGCTATACCGAAGAAACTCTAATGTTTGTTGGAGTCAATAGTCTAGGTCAATT
TTTTATCGCTTAATTTTTCCTTGGATAAACTTCCACTACCTCACTAGAAATGATATGACCTACAAATTCCCCGACCTCAACCAAAACTCATATTTTCTTT
ACTTGGAAAATAGTTGGTTATCCTTAAGCACTTGTAACACCACCCTCAAATAATACATATGTTCTCCGTCAATTTTCGTATATACAAAGATGTTGTCACT
GAAAACAATGACAAATGAATCTAGGTAAATTCAAAACACCCTATTCATGAGATATGTCGATGAGGCATCCGTGAGACCAAAGGATATTACTAAGAACTCA
TAGTGACCATAGCTAGTTTCGAATGTTGTTTTTTGTATATCCTCAATATAAGACCCCTAAAATGATTTAAGTGTGTAGAGACTCACATGTGACTATAAGA
TTTTTAAAATTTTTATTGAGTGTCTTAAAGTATGAATGAGTGACTTGAAGTCGTTTCCAATACGTTCGACGACTAGTTACCAAAGAGGTCCTATGTACTT
TTATGTGCTTATATGGGTGACCTTGACTTATAAAGTCCCTTATATGAGTAATAATTATTTTTTATCAGCACTATCCTAAGTTTCAAAAAGTTTTTGAGTC
AAACCTCCCAAACCGTCCAAAAGTTAGCCCCCGACAACTGCCTTGTGTGTCCGAAGTGTTCCCAGCCAGTTTAAAACCTGTTGCCAGTATTTGTTTTGGG
GTGAAACTGATGGTTGAAGGTACCTCCAATTTTTAAAGCTTTAAATTTCCCGCTTGGAAACAC
>LE_HBa0217C01_T7_392695 (trimmed for quality and cloning vector)
TACTCTTTTGGGTTAAGGTAGTAAAAGGAGAATTAATGGATGCCAAACCATCCAAAAACCTCCTATAGTATCCCGCTATACCGAAGAAACTCTAATGTTT
GTTGGAGTCAATAGTCTAGGTCAATTTTTTATCGCTTAATTTTTCCTTGGATAAACTTCCACTACCTCACTAGAAATGATATGACCTACAAATTCCCCGA
CCTCAACCAAAACTCATATTTTCTTTACTTGGAAAATAGTTGGTTATCCTTAAGCACTTGTAACACCACCCTCAAATAATACATATGTTCTCCGTCAATT
TTCGTATATACAAAGATGTTGTCACTGAAAACAATGACAAATGAATCTAGGTAAATTCAAAACACCCTATTCATGAGATATGTCGATGAGGCATCCGTGA
GACCAAAGGATATTACTAAGAACTCATAGTGACCATAGCTAGTTTCGAATGTTGTTTTTTGTATATCCTCAATATAAGACCCCTAAAATGATTTAAGTGT
GTAGAGACTCACATGTGACTATAAGATTTTTAAAATTTTTATTGAGTGTCTTAAAGTATGAATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944669
Expected error %
1.01712
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217C01
Clone
Clone name
hba-217c1
LE_HBa0217C01
C02HBa0217C01
P217C01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found