Clone Read LE_HBa0235C08_SP6_393395

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235C08_SP6_393395
Primer
SP6
ID from Seq. Facility
LE_HBa_235_C08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
799 trimmed for vector and quality, 892 raw
Sequence
>LE_HBa0235C08_SP6_393395 (raw untrimmed)
NNCCAATATAATTGTGCACCATGCTAGTGCACGCGAATTGAGCTATGTTTTACGACTGGAGAAAACATTTCATTGTAATCAATTCCCTCCTTCTGACTGA
AACCCTTCGTAACCAATTTCGCCTTGAACCTAGCATCTTCCACTTCTGAAATACCTTCTTTCTTTTGGTAGACCCATTTGCATCCAACTGTCCTCATCCC
CTTTGGCCTTTTAACTAAGACCCACGTATCATTTTTGTGAAGGGACTCCATCTCTTCCATCAGGGCTAACTGCCATTGTGCAGCATCTTTGCAAGAAGTT
GCTTCAACATACGAAGAGGGCTCGAGATCCTTAATCTCTTCTTCTGCAGCTATGAACGCATGTGCAATCAGATTTTCTTGCTCTATAAGACGTTCTAGTT
TCCATATCTGCCTTTTGTCCCTTCCCTTTGCAATTGTGTACGGTTCATTGGAAGCAAGTTCTTTAAGATCTGCATCTTTTGACTCATTAATTTGAGTCTC
TTGATCTCGTTCCTTGGTAAGCTCCACCTGCTCGTTGTTCTCGTTTCTAGATAACTCCACAGAGGATCAAGTAAAGAGGATTCATCAAATGTAACATCTC
TACTAACTACAAATTTGAGTAAAGACAAACACCATAGTTTGTACCCTTTTACTTCATCTATATACCCTACGAATATGACCTTTTTAGCTCTTGGTTCAAG
CTTACCTTCATTAACATGATAATAAGCTGGATACCCAAATAATCGCAAGTATGAATAGTTAGAGGGTTCACCTGACCAGACCTCATTCGGAGTCTTAAAG
TCAATCGCTGATGCTGGAGACAGATTGACAATATGAGAAGCAGTATGAACTGCTTCAACCTAAAATACTTTGGACTCTTAGCTTGTAAGAGC
>LE_HBa0235C08_SP6_393395 (trimmed for quality and cloning vector)
GCACGCGAATTGAGCTATGTTTTACGACTGGAGAAAACATTTCATTGTAATCAATTCCCTCCTTCTGACTGAAACCCTTCGTAACCAATTTCGCCTTGAA
CCTAGCATCTTCCACTTCTGAAATACCTTCTTTCTTTTGGTAGACCCATTTGCATCCAACTGTCCTCATCCCCTTTGGCCTTTTAACTAAGACCCACGTA
TCATTTTTGTGAAGGGACTCCATCTCTTCCATCAGGGCTAACTGCCATTGTGCAGCATCTTTGCAAGAAGTTGCTTCAACATACGAAGAGGGCTCGAGAT
CCTTAATCTCTTCTTCTGCAGCTATGAACGCATGTGCAATCAGATTTTCTTGCTCTATAAGACGTTCTAGTTTCCATATCTGCCTTTTGTCCCTTCCCTT
TGCAATTGTGTACGGTTCATTGGAAGCAAGTTCTTTAAGATCTGCATCTTTTGACTCATTAATTTGAGTCTCTTGATCTCGTTCCTTGGTAAGCTCCACC
TGCTCGTTGTTCTCGTTTCTAGATAACTCCACAGAGGATCAAGTAAAGAGGATTCATCAAATGTAACATCTCTACTAACTACAAATTTGAGTAAAGACAA
ACACCATAGTTTGTACCCTTTTACTTCATCTATATACCCTACGAATATGACCTTTTTAGCTCTTGGTTCAAGCTTACCTTCATTAACATGATAATAAGCT
GGATACCCAAATAATCGCAAGTATGAATAGTTAGAGGGTTCACCTGACCAGACCTCATTCGGAGTCTTAAAGTCAATCGCTGATGCTGGAGACAGATTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.960948
Expected error %
0.316037
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235C08
Clone
Clone name
hba-235c8
LE_HBa0235C08
C12HBa0235C08
P235C08
Clone type
BAC
Contamination
none
Estimated length
82,577
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found