Clone Read LE_HBa0217L14_T7_393574

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217L14_T7_393574
Primer
T7
ID from Seq. Facility
LE_HBa_217_L14-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1006 raw
Sequence
>LE_HBa0217L14_T7_393574 (raw untrimmed)
NNNGGGCACTGTCGGGGATCTCTGAGTGACCTGCAGGCATGCAAGCTTGTCTCCTCTTTATGGCACAAGAGTGTCCTGAGTTCCTTTTGTTATCCCGATT
TCCACTACCTAATACTGATATCCCTGATTTACAGTTTGACGATGTTTTTAACATAGCACCTTAATTCACGGTAATGTGGACTTTTACCTATTTAGTTGAA
TCTTGTGCTCCCTCTCATCTCTAACCTACTGTCGACTGATACATTCTGTGCACAACTCCAAGGAATTAACTAAATCTTCCATGTTGACTTCATGGATAGA
CTTCAGTTTTGTCGGAAAATTTTGACTTAATCCATCTCCGAGATCTAGCTGGTGCTCTAAAGCACCCACACAATTTTCTGTTGTTCCGATCCGTCCCTTT
TCTGACATTTCAAGTGGATCTCTCGCTATCCACTGGCCCTCCGGAGAAAAGAATACGTCCTTAATCACCTGCAAGAAATGAAATTCTTGGTTTGATGCTT
ACCACAAACAATGTACGGCATGGTCACAGTCAAATGCCTCTTTCACTCGGAGAAAACCATCCTTTACAGCACAGAAAGATTGTTCACCTGTTGATGACCT
GTCCTGCAAGTTTTTGGGTGTTCTGCTTACAGGACGCTCCCTTACCAACCTTGCGTAATCATCTGATCCTGATGCCAACCTCTCAAGGGCATTACCACTC
AATTTGTTGCTCCGTTACCGTGCCACTCGATGATTTAATTCTACCAGAGCTCATGACTGTGTGGATTTAGAAATTTCCATTGGGCACCACTTGGTATTCT
TCTCGATCTGCGTTCTTTCTTTTTCACTTTGACCCCCCGTGGAAGATCCAGATGCTCTTCCTCCTCGCTACCCCAAAAAATGGTTTTGGTCCTATTTCTC
TCCTTAATACACACTCCTTATTTTTTT
TTTTTTTAGGAAAGGAAACAACAATAAACGGCAAACACCCCCCCCTTCTTGTTTAATCCCCCTCTAAGGAAGA
TGCGCG
>LE_HBa0217L14_T7_393574 (trimmed for quality and cloning vector)
TTTTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.245606
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217L14
Clone
Clone name
hba-217l14
LE_HBa0217L14
C03HBa0217L14
P217L14
Clone type
BAC
Contamination
none
Estimated length
79,658
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found