Clone Read LE_HBa0235G07_SP6_393783

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235G07_SP6_393783
Primer
SP6
ID from Seq. Facility
LE_HBa_235_G07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
750 trimmed for vector and quality, 921 raw
Sequence
>LE_HBa0235G07_SP6_393783 (raw untrimmed)
GCCAAGAAGAGNATTCGATTATAATGGTGGCTCACTTTGGTCGACGAACAGAGAATTGAAACAGCGGTTTGAACGAAATATTTCGCCACCTCTACCTCTT
AAGGTCTTTTGTTTTGTGGCTCGACTAACTTCCCTCAATATACGAATACTTCTCGCCAGGAAATTTCAGCCAAGAATATTAGGCGGAAGATAATTGAAAG
CCAAAAAAAAAATCCCCCCAAAACAGTGAATAGATGGCCCTATATATACTAAATTTTGACGGACGGAGAGCGGAGGATATCACAAAAAGGGTTGGGGTAA
AATCGCGATTTCATTTCCCAATTTGAAATCCAAAAAAAACTAAAAGGATATGGTTGAAATGGAATGGTACGAATTTGTATTATTCTCCAACACCAAGATG
ACCATAGTCGTCCGATTTGAAGGAGAGGACGAGAGGGGAGAGGAGATTTCGACACCTAGGTATACCATTCGTATGAAAGAAAGGGAGAGGGGAAGGGGAC
GCGCTGTACAGGAGATGGGAGGAATTGCGTGGCTGTTGAACGCAGGAATGTGTGAAGAGGAAGAAGGAGTAACGGGTCGGGTTAAAACGGTTTGGGCTGG
AGAAGGAAATGGGGGTTGGGCTGGGAATAAAAGGGAAAAGGAATTGGGCCTGCGAATTAAAGGGAAAAGGATTTAGGTGGGCTGCTGAGTTTAAAAAAAA
TATTTGGGCCTGGGAAAGGGAAAACGGGCTGGGAAATAAATAAAAATAAATGGGCTGGAAAGGGAATTAAAAGGGATTTGGCAAAATGGTCCAAAATTGA
ATTAAATTGGAAAATTAGGATGAGAAAATTTAATAAATTGACCAATTGATTTAAGATGATAATTTTGCTAAACCCTAAAAAAAATGAATTTGGTTTAATT
ATTAACGGACTTTTTTTTTTN
>LE_HBa0235G07_SP6_393783 (trimmed for quality and cloning vector)
ATGGTGGCTCACTTTGGTCGACGAACAGAGAATTGAAACAGCGGTTTGAACGAAATATTTCGCCACCTCTACCTCTTAAGGTCTTTTGTTTTGTGGCTCG
ACTAACTTCCCTCAATATACGAATACTTCTCGCCAGGAAATTTCAGCCAAGAATATTAGGCGGAAGATAATTGAAAGCCAAAAAAAAAATCCCCCCAAAA
CAGTGAATAGATGGCCCTATATATACTAAATTTTGACGGACGGAGAGCGGAGGATATCACAAAAAGGGTTGGGGTAAAATCGCGATTTCATTTCCCAATT
TGAAATCCAAAAAAAACTAAAAGGATATGGTTGAAATGGAATGGTACGAATTTGTATTATTCTCCAACACCAAGATGACCATAGTCGTCCGATTTGAAGG
AGAGGACGAGAGGGGAGAGGAGATTTCGACACCTAGGTATACCATTCGTATGAAAGAAAGGGAGAGGGGAAGGGGACGCGCTGTACAGGAGATGGGAGGA
ATTGCGTGGCTGTTGAACGCAGGAATGTGTGAAGAGGAAGAAGGAGTAACGGGTCGGGTTAAAACGGTTTGGGCTGGAGAAGGAAATGGGGGTTGGGCTG
GGAATAAAAGGGAAAAGGAATTGGGCCTGCGAATTAAAGGGAAAAGGATTTAGGTGGGCTGCTGAGTTTAAAAAAAATATTTGGGCCTGGGAAAGGGAAA
ACGGGCTGGGAAATAAATAAAAATAAATGGGCTGGAAAGGGAATTAAAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94351
Expected error %
0.582873
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235G07
Clone
Clone name
hba-235g7
LE_HBa0235G07
P235G07
Clone type
BAC
Contamination
none
Estimated length
81,645
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found