Clone Read LE_HBa0217N24_T7_393798

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217N24_T7_393798
Primer
T7
ID from Seq. Facility
LE_HBa_217_N24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
30 trimmed for vector and quality, 919 raw
Sequence
>LE_HBa0217N24_T7_393798 (raw untrimmed)
NNNCCTTTATGTCCGGGAATCTCTGAGTCACCTGCAGCATGCAAGCTTGTCGTGCTTCCCAAACTGCATCTTCTCGTTTCATGGGTGAAACCTTCTGCAA
GACTTGTTCACCCTCCAGAAAATCCAAGTCCCTAACCTTTCGATCTGCATATTCTTTCTGCCTGTTCTGAGCTGCTAGAAGCTATCTCTTGAATGAATTT
TACTTTATCTAACGATTCCCTCCAGAGATCAGTACCCCATGATCTCACCACAAATGCATCAAACCTACCAATGGGAGACCTACATCTCCTCCCATACAGT
GCCTCAAAAGGGGCCATATCAAT
ACTTGAGTGATAGTTATTATTGTATGAAAACTCTGCCCAGGGTAAGAAGTTATCCCAATGACCACCTCATTCTATCA
CACTTGCACGAAGTATATGCTCCAACACCTGAAACGTTCGCTCAAACTGACCATCGATCTGAGGATGAAATGCTGTACTCAGATCCAGCCTAGTACCTAA
TTTCAGCATGCAATGTTCCCCAAAATTTAGAAGTAAATTGCGTACCTCTATCTGATATGATGGAAAGTGGAACCCCATGTCATCCAACAATCTCTGAGAT
ATAGAGTTTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAGTGAGCAGACTTAGTTAATCTGTCAACAATTACCCAAATAGAATCGGAC
TTACCCAATGTCTTGGGAAGACCAACCCCAAAATCCATTGCAATTCCTTCCCATTTCCCTTCAAGAATGGGCCTTTTCTGAAATGTTCCCCTGGGCCCCT
GGGGTTCAAACTTTAACCTGCCGAAAATTCCGGGCTTTTGGGGAACAAAAACAAAAAAGGTCCCGCCTTTCTTTTATCTTCCCCACAAAAAGTTGGTTTT
TGGCGCCCCCTAACACCCG
>LE_HBa0217N24_T7_393798 (trimmed for quality and cloning vector)
ACTTGAGTGATAGTTATTATTGTATGAAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.213139
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217N24
Clone
Clone name
hba-217n24
LE_HBa0217N24
P217N24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found