Clone Read LE_HBa0235H02_SP6_393864

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235H02_SP6_393864
Primer
SP6
ID from Seq. Facility
LE_HBa_235_H02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
727 trimmed for vector and quality, 843 raw
Sequence
>LE_HBa0235H02_SP6_393864 (raw untrimmed)
TCGCAATCGAGAACGTAACTGTTTCCGTTATTTAGTTGCCGTATTTAGCATTAGCTCTAGGTGATCCTTTTAATCTATATGGAGTTTCATCATAAACATT
TGAGCACCTTTCAGAAGGTTTTAAAATCTCCAAGCTTCAACAAATTGTAGTAAACGTATAATTCCCAGACATACATTTCTTGCATCAGCAGGGTCTTTTG
TCTCCACGAGGAATTTTTGTGTTTGCTGAATCAAGCTGCCAAAAGGATAATAAAGATCAGCTTCGCATAAAAAGAGAGAAACTAATCAGCATTACATCAT
TAAGTTAATAAGAAAAAACAAGAGTATGATGATAAGCTGTCATGTTATGGCCAAGAGCAAGAATAAATAAAATTGTCACTATTGCATCCAAAAATCAAAT
TTTGAAAGCAAACATATCACCTAGATAAACAGTAGGCAAGTGCCATCACTGTCGATAATGATCGTATAAAATTAAGAAATCTTTGCTTGACTGCCTGGCT
AGAAACTGTAGGTAGAACCAGTGGATCTATTGCTCTGCAAACGTTCAATACCAGCAGCATGAGCGCTTTATAAAGCATATATCTAACTTTATTTCAACTT
TGTTTAAATTGCACTGCCATTTAACCTGCATATAAGTATTGCTCCAGTCCATAAAAGCACAGGTTTAAGATAGGAAGCTGTAACATAATGCCAGCTACTC
TGTTTCCAATTGCTATCACTTTCCTGCAAGAATATTTTCAGACAAAGCTTTAATTTGGGAAGAGATAATGATGTATACAACTTGCAGCAAGCCAGCAAGA
AAGATTGTCTAGAGAAACCAGTACATGAAGGAAAAGCTTTCTC
>LE_HBa0235H02_SP6_393864 (trimmed for quality and cloning vector)
TATTTAGTTGCCGTATTTAGCATTAGCTCTAGGTGATCCTTTTAATCTATATGGAGTTTCATCATAAACATTTGAGCACCTTTCAGAAGGTTTTAAAATC
TCCAAGCTTCAACAAATTGTAGTAAACGTATAATTCCCAGACATACATTTCTTGCATCAGCAGGGTCTTTTGTCTCCACGAGGAATTTTTGTGTTTGCTG
AATCAAGCTGCCAAAAGGATAATAAAGATCAGCTTCGCATAAAAAGAGAGAAACTAATCAGCATTACATCATTAAGTTAATAAGAAAAAACAAGAGTATG
ATGATAAGCTGTCATGTTATGGCCAAGAGCAAGAATAAATAAAATTGTCACTATTGCATCCAAAAATCAAATTTTGAAAGCAAACATATCACCTAGATAA
ACAGTAGGCAAGTGCCATCACTGTCGATAATGATCGTATAAAATTAAGAAATCTTTGCTTGACTGCCTGGCTAGAAACTGTAGGTAGAACCAGTGGATCT
ATTGCTCTGCAAACGTTCAATACCAGCAGCATGAGCGCTTTATAAAGCATATATCTAACTTTATTTCAACTTTGTTTAAATTGCACTGCCATTTAACCTG
CATATAAGTATTGCTCCAGTCCATAAAAGCACAGGTTTAAGATAGGAAGCTGTAACATAATGCCAGCTACTCTGTTTCCAATTGCTATCACTTTCCTGCA
AGAATATTTTCAGACAAAGCTTTAATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949583
Expected error %
0.461101
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235H02
Clone
Clone name
hba-235h2
LE_HBa0235H02
P235H02
Clone type
BAC
Contamination
none
Estimated length
52,778
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found