Clone Read LE_HBa0235K16_SP6_394214

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235K16_SP6_394214
Primer
SP6
ID from Seq. Facility
LE_HBa_235_K16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
672 trimmed for vector and quality, 813 raw
Sequence
>LE_HBa0235K16_SP6_394214 (raw untrimmed)
ATCCCTTTAAGGATAAACCAAGGTTCAAAAAGAGGTTTTCTGATCTCTTTAAACTCCATGCTCCAAATCCTAATCAAGGGCGGAGGACTAACCCTAATCT
CAAAATAAATATAAGAGTGTCCCTTTTGTGGAAAGAACTAATTCTGCAAAGTTTGGTAAACATCATGAAGGAAAGTGTGTTGACGGTACGGAAATTTTCT
ATGGATGTGGGAAAAGTGGCCACCAATTGAAGGATTGTCCAATATGTGCATCCAAAGGAAAGGAAAGCACCCAAACTCCCACTAACACTCAAAACCCCAA
TGATCCTAAAAATAATTACTTCTATTCTCTCTGCTCTAAGGGTGATCAAGAGGGGTATCCCGATGTTGTCACTGGTATATTATGAGTGTTTTCCATTAAT
GTCTATGCTTTACTATATCCCGATGCCACTTTATCTTTTGTAATCCCTTTAGTGGCCATGAAGTTTGATGAACTTCCCAATGTTTTCCATGAACCTTTTT
TGGTTTCTACCCCGGTGGGTGATTCCGTACTTTCTAAAAGAGTTTATAGGGGTTGTCCCATTTTATTTATTAATAGAGTCACATTGGTTGACTTGGTAGA
ACTTGATATGTTGGACTTTGATGTTATTTTAGGGATAGACTGGCTACATTATTTTTTTGCTTCCATTGATTGTAGAACTCAGGTAGAGAAGTTTAAATGT
ACAAATGAACCTGTTGTAGAGTGGAAGGGGGGGAACCTATTTCCAAGGAATGAAACTCTTTCTTGTCTTAATCTTAAAAAGTTTTTCTCTTGGTGATTTT
TCTATAATCCTTA
>LE_HBa0235K16_SP6_394214 (trimmed for quality and cloning vector)
AACCAAGGTTCAAAAAGAGGTTTTCTGATCTCTTTAAACTCCATGCTCCAAATCCTAATCAAGGGCGGAGGACTAACCCTAATCTCAAAATAAATATAAG
AGTGTCCCTTTTGTGGAAAGAACTAATTCTGCAAAGTTTGGTAAACATCATGAAGGAAAGTGTGTTGACGGTACGGAAATTTTCTATGGATGTGGGAAAA
GTGGCCACCAATTGAAGGATTGTCCAATATGTGCATCCAAAGGAAAGGAAAGCACCCAAACTCCCACTAACACTCAAAACCCCAATGATCCTAAAAATAA
TTACTTCTATTCTCTCTGCTCTAAGGGTGATCAAGAGGGGTATCCCGATGTTGTCACTGGTATATTATGAGTGTTTTCCATTAATGTCTATGCTTTACTA
TATCCCGATGCCACTTTATCTTTTGTAATCCCTTTAGTGGCCATGAAGTTTGATGAACTTCCCAATGTTTTCCATGAACCTTTTTTGGTTTCTACCCCGG
TGGGTGATTCCGTACTTTCTAAAAGAGTTTATAGGGGTTGTCCCATTTTATTTATTAATAGAGTCACATTGGTTGACTTGGTAGAACTTGATATGTTGGA
CTTTGATGTTATTTTAGGGATAGACTGGCTACATTATTTTTTTGCTTCCATTGATTGTAGAACTCAGGTAGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.945261
Expected error %
0.561746
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235K16
Clone
Clone name
hba-235k16
LE_HBa0235K16
P235K16
Clone type
BAC
Contamination
none
Estimated length
129,513
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found