Clone Read LE_HBa0235O17_SP6_394615

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235O17_SP6_394615
Primer
SP6
ID from Seq. Facility
LE_HBa_235_O17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
598 trimmed for vector and quality, 879 raw
Sequence
>LE_HBa0235O17_SP6_394615 (raw untrimmed)
NNCCAGATAGATTTATTTTGTTTGGAGACCACACATGAAAACAAACAACTTGTTAAGGAAAATCATGCTCTTATTGAAGCTATTTTATGGATTTTGAAGA
GTCGCGAACTTTGCTACGATAATAATCAAGTTGTAACATCAATCAAGACTCATGCAATGTTGGTACTGAAAAATGTGATCTCATTTTCAAGTACAAATGT
TTTATCGAGTCTAACACCTGAATTTTTCCAACAAATGTTGAATAGTTTGAGGAAAAACAATGTAAAATACATTTGTCAACAAGCCACAAAAGCAGCGTTA
CATGTGCTAATAGATACTTGTCCAGGGGGACGAAACAGGCTGAAAATGATCGAATTAGGGGCTGTTTTCGAGCTAATTGAGCTCGAATTAAGCAACAATG
AGAAAAGGGTAAGTGAGTTAGTGTTTTCACTTTTGTCACATTTGTGTAGTTTAGCTGATGGAAGAGCAGAGTTACTAAAACATGCAGCTGGAATTGCAAT
TGTTTCTAAAAAGATACTTAGGATTTCACCAGCAACAGATGAAAGTGCAATTCAAATTATTGGATTGATTGCCAAGTTTTCAGCTACAAAAGAAGTGTTG
ATGGAAATGTTAAGAGTTGGGGGGAGTGACAAAGTTATGTATGGTGATTCAAGCAAATTGTGAAACAAGTTTAAGGAAAAAAGCACTGGAAATATTAAGG
GCACATAATAATGGTTGGGAGCAACTCTCCATGTGTACAAATTTATTTTTTTGACAGATATCCTGGTCAAAAGATTCAATTTTGTTATGATAACTTGTAG
AAATTGTAGCAACATTTATATGCCTTTTATTCTCCGCATAACAATAGGCAAAATATACATTGAAAACTTCATTTTAGTA
>LE_HBa0235O17_SP6_394615 (trimmed for quality and cloning vector)
ATTTTGTTTGGAGACCACACATGAAAACAAACAACTTGTTAAGGAAAATCATGCTCTTATTGAAGCTATTTTATGGATTTTGAAGAGTCGCGAACTTTGC
TACGATAATAATCAAGTTGTAACATCAATCAAGACTCATGCAATGTTGGTACTGAAAAATGTGATCTCATTTTCAAGTACAAATGTTTTATCGAGTCTAA
CACCTGAATTTTTCCAACAAATGTTGAATAGTTTGAGGAAAAACAATGTAAAATACATTTGTCAACAAGCCACAAAAGCAGCGTTACATGTGCTAATAGA
TACTTGTCCAGGGGGACGAAACAGGCTGAAAATGATCGAATTAGGGGCTGTTTTCGAGCTAATTGAGCTCGAATTAAGCAACAATGAGAAAAGGGTAAGT
GAGTTAGTGTTTTCACTTTTGTCACATTTGTGTAGTTTAGCTGATGGAAGAGCAGAGTTACTAAAACATGCAGCTGGAATTGCAATTGTTTCTAAAAAGA
TACTTAGGATTTCACCAGCAACAGATGAAAGTGCAATTCAAATTATTGGATTGATTGCCAAGTTTTCAGCTACAAAAGAAGTGTTGATGGAAATGTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.941733
Expected error %
0.370907
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235O17
Clone
Clone name
hba-235o17
LE_HBa0235O17
C06HBa0235O17
P235O17
Clone type
BAC
Contamination
none
Estimated length
128,340
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found