Clone Read LE_HBa0236A04_SP6_394765

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236A04_SP6_394765
Primer
SP6
ID from Seq. Facility
LE_HBa_236_A04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 931 raw
Sequence
>LE_HBa0236A04_SP6_394765 (raw untrimmed)
CAAGCGGCGAAAAAAACCAGGAGGTGCCGATAAAGGATGAAAAGAGGGAAACTGGGAGNAAAGGCATAAAGGGGNNNAAAANATNANANNNAAAAAGNAN
AAAACTAAAGAGGGCCCNNNNNAATTGGGNNNNNNNNNNNNNNNNNNNGNNNGNNNNGNGNNNNNNNNNNGGTTCCCGAGGAGGGGNGNNGCNCCNCGGN
NGGGCCCNNGG
GGGGGGGGGGGGGGGGGCNNNCCNNCNNNGGGGGNGNCNGNGGGGGGGGGGNNNGCCGGGCGGGGGNGGGGGGGCNCGGGCCCNGNGGG
GCGGGCCGCGCGGGGGGGGGCCGGGGNGGGGGNNCNGGGCGCGGGCGGGGGCCCCCCGGGGGCGGGGCGGGCGGGGGGGGGCNNGGGGNNCGNNCGCGCG
GGCGCCCGGGCGNNCGGGCGGGGCGGGGCGCCCGGCGGGGGGGGGGGGGGGCNGNNCGGNNNGGGCGGGGGGGGNGGNGGGGGCCGGGNGGCCNNGGGGG
GCGGGGGGCGGGGCCGCNNGGGCCGCGGGNGNGGNGCGGCNGCGGGGNGCGGGGGGGGGGGGGGCGCGGGGCCGGGCGCGGGCCCGGGGGGGGGGGCCGG
GGGGGGGGGCGGCGGGGGCCCGGCGGGGGGGGCGGNGGCGGGGGCCGGGGGGGGGGGGGCCGCGGGGGGGGGGCGGGNGGGGGGCGGGGGGGCCGGGGGG
CCGGGGCGGNGGGGGGGGGNGGGCGGGGGCGGGGNGGGGGGGGGCCGGGGCCGGGGGCCCNNGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGNGGCCNCC
GGGGGGGGNGGGGGGGGNNGCGGGGGGGGCGGGGGGGGGGGCGGGCCGGGGGGGGGGCGGCGCGGGGGGGGCGGGCGGCGGGGGGGGGGGGGGGGGGCGN
CGCCCGGGGNGGCGGGGGGGGGGGGCCGGGG
>LE_HBa0236A04_SP6_394765 (trimmed for quality and cloning vector)
GGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.31183
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236A04
Clone
Clone name
hba-236a4
LE_HBa0236A04
P236A04
Clone type
BAC
Contamination
none
Estimated length
94,360
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found