Clone Read LE_HBa0236D19_SP6_395151

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236D19_SP6_395151
Primer
SP6
ID from Seq. Facility
LE_HBa_236_D19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
786 trimmed for vector and quality, 963 raw
Sequence
>LE_HBa0236D19_SP6_395151 (raw untrimmed)
NAATAGCGTNNNNNGCAATTGATCCAGTAGAGAAGCATTCCTAAAATCTATTGGTCTCTCACAAGAATGAAACAAATTAAGAAAATAATTAGAAACATAA
AAGTATGACAAACTTCTTAGATCTTAAAAGTTGGGTTCCAAGGAGGCAAAGAGAAAAAAATTTCTCTTGAATAGTGTTCTTGTTTATGGAGAGCTTATCC
TACCTCACTACCAAAAGAAATAATTTGTCAAGCAAGAAGAAAAAAATTGCAGAGGAGAAGTGCATGAGACGCTCAAGAAGTTAGCAAGCCCTCAGAAGAA
GTTAATTACATGCAAGAAATTAGAAACTTTCAGGTTACAAGTCTATAGACACCTAACCTAAATAAGTTACAAGTCTCTATTGTCAGAGTGAGATCATTGT
AAGATTCACATTCATGTCTTCCAATACCTCAATTGCAGTTTCATGGGCTTGACTATAAACAAGATGAAGGGGAAGCATTCCTGCTAGATGTTCTGACACG
GCAGCCAAAGCAGCTTTAACAGGCTTCCTGTATAACAGATGAGAAAGCAAATGCCAGATCAGCATTGTCCATTTCCACAATATCTTAAAAAACCATCAAA
TCCCACTCAAAATAGAGTTCTTTTGAGATGAGAATTCAGGTAAGCTAAAGAAAGAACAACAAACCTGAAATCACATGGAGGTAAGTTGTCTCAAATTCAA
AAGATCAACTGTATCTCTAAATCAACCCGGAATTAACTAAGAACACAATACAAGGAAAGGAATCCATACATGTGAAACCATTGAGTATTAAGAGTTTATT
GTTGTTGTATGCCTATATTAGGTCTAGTATTTTTCACGAGCCTTTTATGTCTAACTAAAGACCGTATGTTAGTGTCAAGAATAGTGTGAGAGTCAGGGAA
TGTAGTCTTAGAGAATACCTTGTTTGCTTTAAAGAAATTTTTCTACTAATTTTGGAATGAAAT
>LE_HBa0236D19_SP6_395151 (trimmed for quality and cloning vector)
GAAGCATTCCTAAAATCTATTGGTCTCTCACAAGAATGAAACAAATTAAGAAAATAATTAGAAACATAAAAGTATGACAAACTTCTTAGATCTTAAAAGT
TGGGTTCCAAGGAGGCAAAGAGAAAAAAATTTCTCTTGAATAGTGTTCTTGTTTATGGAGAGCTTATCCTACCTCACTACCAAAAGAAATAATTTGTCAA
GCAAGAAGAAAAAAATTGCAGAGGAGAAGTGCATGAGACGCTCAAGAAGTTAGCAAGCCCTCAGAAGAAGTTAATTACATGCAAGAAATTAGAAACTTTC
AGGTTACAAGTCTATAGACACCTAACCTAAATAAGTTACAAGTCTCTATTGTCAGAGTGAGATCATTGTAAGATTCACATTCATGTCTTCCAATACCTCA
ATTGCAGTTTCATGGGCTTGACTATAAACAAGATGAAGGGGAAGCATTCCTGCTAGATGTTCTGACACGGCAGCCAAAGCAGCTTTAACAGGCTTCCTGT
ATAACAGATGAGAAAGCAAATGCCAGATCAGCATTGTCCATTTCCACAATATCTTAAAAAACCATCAAATCCCACTCAAAATAGAGTTCTTTTGAGATGA
GAATTCAGGTAAGCTAAAGAAAGAACAACAAACCTGAAATCACATGGAGGTAAGTTGTCTCAAATTCAAAAGATCAACTGTATCTCTAAATCAACCCGGA
ATTAACTAAGAACACAATACAAGGAAAGGAATCCATACATGTGAAACCATTGAGTATTAAGAGTTTATTGTTGTTGTATGCCTATA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943736
Expected error %
0.107898
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236D19
Clone
Clone name
hba-236d19
LE_HBa0236D19
C12HBa0236D19
P236D19
Clone type
BAC
Contamination
none
Estimated length
116,230
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found