Clone Read LE_HBa0236F18_SP6_395360

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236F18_SP6_395360
Primer
SP6
ID from Seq. Facility
LE_HBa_236_F18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
713 trimmed for vector and quality, 961 raw
Sequence
>LE_HBa0236F18_SP6_395360 (raw untrimmed)
GCCCCGGCTTTGGACANNTTNNGNGACTCCTCCGNANAGAAAGAGGTGAGCAAATTTTGCTTCTTCCTAGGTGTTGGAGGCAAGATAGGATGGTCATAAG
GAATAATATCAACAACCAAACAGGTTGTATCATCCTTCAGACCTCTTGACCTTACTGCTTCCTGAGTTGTAAAACCGCTTATAGTTAGAGAAAACCTCAC
AGATAAGAAATAATAGAATGAAAGAGATTATATGATCATTCACACCTTCACAACCAGCTTTGCCGCAAGTTCTGCCGGTAAACCTCTGCAAGACTGTGCT
GCCAAATCCGATGTTAAAGCATCCCATATACCATCCGACGCTATAATAAGCCTCCCACCAGCATTTGAAATCTAATTACATATTTACTTACAGTTCAGAT
TCATACATGAAACTTGCTACAAGACAAAAGGGAAACTCTTGGTGATAAAGGTAACAAACCTTCACTTGTTTCACATGCGGTACTGGAACGATAAACTCCC
CAACATCCGTATCACCAATAGACCTTGAAAGGCACAACCCACCAGGCCAGCAACGCAGAGGTCCAACCTATAAAAGAAGTGAATAGGAACATCAGGATAT
CTTTTCCAAAGCTGTTAGCAATTTCAAATTTTTGATATGATTATACCTCATTACCCCCAAAAACATTGAGTCTTCCTACTTGACCACCACTTGCAGTTAC
ACGCTGCCGTTCCTCCTCATTCTCTTCTAATCGATGGTCAACAGTCAACAAAGAAATCACACCTCCTTGGGTGTCCAGTATGCACCTGGAATCTCCAACT
GATGCAACAGTGATCGTCCACCCATCGATCCCACAAAAGTCACCGTAGTCCCAGATGTTCCACTGTCACAATTTCAAAATTGTACTGGACACCCCTGAAT
GAATGAAGCCAGGGAAAAAACCCCTTTAACAAAATAAATATTAAGCCCGAAATCTTGCACC
>LE_HBa0236F18_SP6_395360 (trimmed for quality and cloning vector)
AAAGAGGTGAGCAAATTTTGCTTCTTCCTAGGTGTTGGAGGCAAGATAGGATGGTCATAAGGAATAATATCAACAACCAAACAGGTTGTATCATCCTTCA
GACCTCTTGACCTTACTGCTTCCTGAGTTGTAAAACCGCTTATAGTTAGAGAAAACCTCACAGATAAGAAATAATAGAATGAAAGAGATTATATGATCAT
TCACACCTTCACAACCAGCTTTGCCGCAAGTTCTGCCGGTAAACCTCTGCAAGACTGTGCTGCCAAATCCGATGTTAAAGCATCCCATATACCATCCGAC
GCTATAATAAGCCTCCCACCAGCATTTGAAATCTAATTACATATTTACTTACAGTTCAGATTCATACATGAAACTTGCTACAAGACAAAAGGGAAACTCT
TGGTGATAAAGGTAACAAACCTTCACTTGTTTCACATGCGGTACTGGAACGATAAACTCCCCAACATCCGTATCACCAATAGACCTTGAAAGGCACAACC
CACCAGGCCAGCAACGCAGAGGTCCAACCTATAAAAGAAGTGAATAGGAACATCAGGATATCTTTTCCAAAGCTGTTAGCAATTTCAAATTTTTGATATG
ATTATACCTCATTACCCCCAAAAACATTGAGTCTTCCTACTTGACCACCACTTGCAGTTACACGCTGCCGTTCCTCCTCATTCTCTTCTAATCGATGGTC
AACAGTCAACAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.974518
Expected error %
0.121024
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236F18
Clone
Clone name
hba-236f18
LE_HBa0236F18
P236F18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found