Clone Read LE_HBa0236O10_SP6_396211

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236O10_SP6_396211
Primer
SP6
ID from Seq. Facility
LE_HBa_236_O10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
671 trimmed for vector and quality, 956 raw
Sequence
>LE_HBa0236O10_SP6_396211 (raw untrimmed)
TTTCGCGCAGATCAAANNNNNNNANTNNANNANNAGNTGAAANTGTTATTATATGTGACATTTTTTCTTCTCCTATTATATATAGATAGATAGAGCTCTT
TCAGTAAGGAAATTAATAAAGAACAAAATAGTACACTACACATGGACATTCTTGACTTACTTTTTTCCGTATGGCAACTCAATGTCTCCATTGCAGATCA
ACCATTTGCTTTCTATAAGGGAATTGATACGAGTCTTCCGAAGCTCTGTTTAGATTCCCATTGACAACAAGGAAATTCCATTTGGTCAACACACTTAACT
CTTCTGCAGAGTTTCCTCTGCTTTTGTTTGAACTACTCCATAATCCTTGTTTTAATTTTCCTATTCATACAGGTTGAATCAACAGAGTTGTACATTCCTA
ATATATACACATATCCTTTATTTATCTATAATAATTTTCTTTAATTTATAAGAAAAAAATTCACTTGTTCAATCAGAAATAATTTGTCTGTGTTAATCAC
CCATAACCAAGAATGACTTTTCATTAGAAAACACAACTTAAACTCCAGGTCAGCTCAACCTATATCACATACATTGAGATGAAGAGAGTAACTAGATAAT
ATTTCTCCTTGAAAGAATCTTGACTCCTACGATTCACATCCATTACCTAAGAAAACTGTTGTGCAACAACAGATGCAGCAAATAGTAAGAAAATACGGGA
TAAAAAGTAACCACATTGATCCCACCTTCAATGACTCGTGAAGTCATGTCTACCTACTGGTTAAATCACACTGCCCTTATCAACCCATCAAAACAGAAAT
ACCACTGACGGCTGCCAGGTTAGGAATTTGTCCTCATGTGTAGCCTAAATATGTATAAAACAGAGGGGTCAGGCCTAAAAAAATTGAATACCCCCCAAAA
AAAGTATGAAAAACAAGATGGGTTAAGTGCAAAATATTTTATAACCCCCCCTTAAA
>LE_HBa0236O10_SP6_396211 (trimmed for quality and cloning vector)
ATTATATGTGACATTTTTTCTTCTCCTATTATATATAGATAGATAGAGCTCTTTCAGTAAGGAAATTAATAAAGAACAAAATAGTACACTACACATGGAC
ATTCTTGACTTACTTTTTTCCGTATGGCAACTCAATGTCTCCATTGCAGATCAACCATTTGCTTTCTATAAGGGAATTGATACGAGTCTTCCGAAGCTCT
GTTTAGATTCCCATTGACAACAAGGAAATTCCATTTGGTCAACACACTTAACTCTTCTGCAGAGTTTCCTCTGCTTTTGTTTGAACTACTCCATAATCCT
TGTTTTAATTTTCCTATTCATACAGGTTGAATCAACAGAGTTGTACATTCCTAATATATACACATATCCTTTATTTATCTATAATAATTTTCTTTAATTT
ATAAGAAAAAAATTCACTTGTTCAATCAGAAATAATTTGTCTGTGTTAATCACCCATAACCAAGAATGACTTTTCATTAGAAAACACAACTTAAACTCCA
GGTCAGCTCAACCTATATCACATACATTGAGATGAAGAGAGTAACTAGATAATATTTCTCCTTGAAAGAATCTTGACTCCTACGATTCACATCCATTACC
TAAGAAAACTGTTGTGCAACAACAGATGCAGCAAATAGTAAGAAAATACGGGATAAAAAGTAACCACATTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.936082
Expected error %
0.370239
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236O10
Clone
Clone name
hba-236o10
LE_HBa0236O10
P236O10
Clone type
BAC
Contamination
none
Estimated length
112,633
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found