Clone Read LE_HBa0219K16_SP6_396432

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0219K16_SP6_396432
Primer
SP6
ID from Seq. Facility
LE_HBa_219_K16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
757 trimmed for vector and quality, 1021 raw
Sequence
>LE_HBa0219K16_SP6_396432 (raw untrimmed)
GCTATGAGTCTGATTGTCATGACCAGACATAGCTTGCGCTATCAGTAAACTAAGTCGATACACCATTAATCCTAATCAAAGTCATTGGTTGACAATGAAG
AGAGTTTTGAGGTACTTAGATGACACTCAAAACTATGCTTTATATTACAACAAATATCCAGTCGTTCTTGAAGGATATAGTCATGCAAAATTGGATTACT
GGGTCAACTAAAACAAAATTCACAAGTGGATACGTTTTTCTATTGGTGAAGGAGCAATATCTTGGAAATCATCCAAACAAACATATATAGCTCGCTCTAC
AATGGAGTCTGAATTCATTTCTTTACACAAGGTAGGTGAAGTTTAATGGCTCTGGAATTTCTTAGAAGATATTCCATTTTGGCCCAAACCAATGGCCCCT
ATATGCATACACTGTGATAGTCAAGCTATAATAGGATGGGCTCGAAGCATTATGTATAATGGCAAGTCTCGTCACATAAGACGAAGACATAACTATGTGA
GACAACTACTCTAGTGGAATTATCACAATTGACTATGTGAAGTCAAAAGATAATGTGTCGTATCCACTTACAAAAGGCCTAGCTAGAGAGGGAGTTGAGA
AATCATCGACGGGAACGAGACTATGGACAAGAACAAGTCATTGTGGCGGTAACTCTACCTAGAAGACTGGAGATCCCAAGATCTAGGTTCAAGGAGATAA
AACAAAGTCATTGATAACTTTTTAATATTATCAAGAAAAAATATTATTATATGGTCCATTCTCATGATGAGACAATGTTTAATAAACAGGATAAAGACAT
AAGGACTTTTTAATGGTTTCTAAGTTTGATACAGGGAATATCAAATGGTGTATATATGGAAAACACATTTTAAAATCCACTATGTAAGTGTGAAATTTAA
GCCCCTTCAAGAGAATTCGATGAAGCCAGTTCTTTAAACCTTACTATCCAAAAGGGTTCTGGGTGCTAAAAAAAAAAAATGAAACTAGAAACAGTCCAGG
GTTGATGGGTGAAAAATTTTT
>LE_HBa0219K16_SP6_396432 (trimmed for quality and cloning vector)
GACCAGACATAGCTTGCGCTATCAGTAAACTAAGTCGATACACCATTAATCCTAATCAAAGTCATTGGTTGACAATGAAGAGAGTTTTGAGGTACTTAGA
TGACACTCAAAACTATGCTTTATATTACAACAAATATCCAGTCGTTCTTGAAGGATATAGTCATGCAAAATTGGATTACTGGGTCAACTAAAACAAAATT
CACAAGTGGATACGTTTTTCTATTGGTGAAGGAGCAATATCTTGGAAATCATCCAAACAAACATATATAGCTCGCTCTACAATGGAGTCTGAATTCATTT
CTTTACACAAGGTAGGTGAAGTTTAATGGCTCTGGAATTTCTTAGAAGATATTCCATTTTGGCCCAAACCAATGGCCCCTATATGCATACACTGTGATAG
TCAAGCTATAATAGGATGGGCTCGAAGCATTATGTATAATGGCAAGTCTCGTCACATAAGACGAAGACATAACTATGTGAGACAACTACTCTAGTGGAAT
TATCACAATTGACTATGTGAAGTCAAAAGATAATGTGTCGTATCCACTTACAAAAGGCCTAGCTAGAGAGGGAGTTGAGAAATCATCGACGGGAACGAGA
CTATGGACAAGAACAAGTCATTGTGGCGGTAACTCTACCTAGAAGACTGGAGATCCCAAGATCTAGGTTCAAGGAGATAAAACAAAGTCATTGATAACTT
TTTAATATTATCAAGAAAAAATATTATTATATGGTCCATTCTCATGATGAGACAATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96024
Expected error %
0.343811
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0219K16
Clone
Clone name
hba-219k16
LE_HBa0219K16
P219K16
Clone type
BAC
Contamination
none
Estimated length
90,206
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found