Clone Read LE_HBa0237F11_SP6_396926

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0237F11_SP6_396926
Primer
SP6
ID from Seq. Facility
LE_HBa_237_F11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1023 raw
Sequence
>LE_HBa0237F11_SP6_396926 (raw untrimmed)
GACCCACTCCGGGAAGAGGCGGGGAAGANNANNANAAAANNAANNAAAAAGGGAAATCATAAGAAGAGGGGGGCANNNANANNAANGANAAAAAAAAAAA
AANAAAAAAANNANAAAAAAAGAAGAAAAAAAAAAAGAGAAAAAGAAAAAGATCCGAAAGGGAGGGNGAGAANAAAAAGGAAGNNAGAAAAANAACAAGA
AGAAAGGAAGGAACAAAGAAAGAGAAAAANAGAAAAAAAAGAAAAGGAAAGAAGAGAAGAAAAAGAAAAGAAAAGAAAGAAGAAGAGAAAAAAAGGAAAG
ACAAGAGGAAAAAGAAAACAGGAAACGAGAAAGGAGAGAAAAGAGGAAAAAGAACAGGAACAGAAGAAAAAAAGAAAAAAGGAGAAAAAAAAAGAAAGAA
AAAACAAAAAAAGGAGAAAAAAAAAAAAAGGGAAGGAGGGGCAACAGAAAAAAAAGAAAAAAGAAAAAAAAAAAAAGAAGAAAAGAGAGAGGAGAAAAAA
AAGAAAAAAAGGAAAAGAAAAAAAAAGAAGAAAAGGAGAAA
AAAAAAAAAAGAGAAAAAAAGAAAAGAAAGAAAGAAAGAAAAAAAAGAGAGAAAAAGAA
AAAAGAAAAAGAAAAAAAGAAAAGAGAAAAGAGAAGAAAGAAAAGAAAAAAAAAGAGAAACAAAAAAAAGAGAAAAAAGAGAAAAAAAAAGAAAAAAAAC
AAGAGAAAAAAAAAAAAAAAGAAGAAAAGGGAAAAGAAGAAAAAAAAAGAGAAAAAGAAAAAAAAAGAGAAGAAAGAAAGAAAGAAAAGGAAGAGAGAAA
GAAGAAGAAAAGAAAAAAAAAAGAAGAAAAAAGAAAGGAAAAGAAGAACGAAAAGAAAGAAAAAAGAAAAAAAAAAAAAAAGAAAGAGAAAAAGAAAAAA
AGAAAAAAAAAGAGAGAAAAGAAAAAAAAAAAAAGAAGAAAGAAGAGAAAAAAGAAAGAAGAAAAAAAAGAAAAAAAAAAAAAAGAAAAAAAAAGAGGAA
AAAAAAAGAAGAAGAAAAAAAGA
>LE_HBa0237F11_SP6_396926 (trimmed for quality and cloning vector)
AAAAAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.306482
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0237F11
Clone
Clone name
hba-237f11
LE_HBa0237F11
C12HBa0237F11
P237F11
Clone type
BAC
Contamination
none
Estimated length
101,188
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found