Clone Read LE_HBa0221C23_SP6_397182

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0221C23_SP6_397182
Primer
SP6
ID from Seq. Facility
LE_HBa_221_C23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 925 raw
Sequence
>LE_HBa0221C23_SP6_397182 (raw untrimmed)
GCACTATACTTCTACTTTTAATTAAATGAATAATAAATAAATAAATATAAAGTTGAAATAAAATCGTTTGTCTTTGTCACGTCCAGAGCCTACATTTTGG
ACGTGGGTGACACTCGAGAACCATTGTTGGCCTCAAGCGAACCCTTGGCCTGATTTACTTACTCATTGTAAGACTTAACTTAACTAATAATCAAAAAACA
TAACTTTAAAAAGATATGAAACTTGGCCAAAATGACAACTTATTCCTTTAAACAACATCTGGGTGATAATTTAACAACACTTAACAACTAACTGTCTATG
AAGCCTCTAAAACAATGAGGGATGTTGGGCAAGAAACTCGATTAGCCTAACAATTAAATACTAAAAACAAAGTAAAAGAGTCCTCCGGAATGTGGAGTCT
CACCAATGTGACTTTGAGTGCTAAACTGGATCAACGAGGCGTGGGTGTTGATCCAGGTTACTTGCGTCTGCATCATCAGATGATGCAGGCAAACTGACAT
GAGTTTATTGAATGTACGAGTATGCATGTTGGAATGTTAAACACAACTTAAGCGTGAAAAGAATCTGGAATGAACACTTACCTTGGCTATATTCAAATCA
TGAACAACTTAACTCAATGTAAAATAACAAAATACATTAAATATATATTACGCTTGTAAAACATTGGAAAGCAACTTAGTTTGTTTATATAAATTAAATA
ACAAACTCAATTTTACTCATATAATAAAGTAATATATGTTATGTTTGAGTTTAGCTAACCAACAACTACTATTATGAGCCTAAGTGGTGATACTTTGTCT
TTGCCCACGCTGCCAGACATTACATAGAAACGCTTTAACTAATGGGAAACCCTACTCTATGCCAACATCATTTTAATGAATAATCTAAAAAATTATGATC
CTTTACCACCCATGAATGTCAACCA
>LE_HBa0221C23_SP6_397182 (trimmed for quality and cloning vector)
AATAAATAAATAAATATAAAGTTGAAATAAAATCGTTTGTCTTTGTCACGTCCAGAGCCTACATTTTGGACGTGGGTGACACTCGAGAACCATTGTTGGC
CTCAAGCGAACCCTTGGCCTGATTTACTTACTCATTGTAAGACTTAACTTAACTAATAATCAAAAAACATAACTTTAAAAAGATATGAAACTTGGCCAAA
ATGACAACTTATTCCTTTAAACAACATCTGGGTGATAATTTAACAACACTTAACAACTAACTGTCTATGAAGCCTCTAAAACAATGAGGGATGTTGGGCA
AGAAACTCGATTAGCCTAACAATTAAATACTAAAAACAAAGTAAAAGAGTCCTCCGGAATGTGGAGTCTCACCAATGTGACTTTGAGTGCTAAACTGGAT
CAACGAGGCGTGGGTGTTGATCCAGGTTACTTGCGTCTGCATCATCAGATGATGCAGGCAAACTGACATGAGTTTATTGAATGTACGAGTATGCATGTTG
GAATGTTAAACACAACTTAAGCGTGAAAAGAATCTGGAATGAACACTTACCTTGGCTATATTCAAATCATGAACAACTTAACTCAATGTAAAATAACAAA
ATACATTAAATATATATTACGCTTGTAAAACATTGGAAAGCAACTTAGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948262
Expected error %
0.160878
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0221C23
Clone
Clone name
hba-221c23
LE_HBa0221C23
P221C23
Clone type
BAC
Contamination
none
Estimated length
75,207
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found