Clone Read LE_HBa0238D24_SP6_398399

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238D24_SP6_398399
Primer
SP6
ID from Seq. Facility
LE_HBa_238_D24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
664 trimmed for vector and quality, 809 raw
Sequence
>LE_HBa0238D24_SP6_398399 (raw untrimmed)
NCCGCTTCATCGTGATTTCAGAAAATTGTCTTTTTTCATTTTCTTTTCAATGGCTTCGTGTTCCTTTAAGGTATATGTTTAGAATGCTGAAAATGAAGCT
TTCATTTTTAAGAATTGCCTTAACAATTATATATGTTGAGATTGGAATTAACTAGTGCATTATATCTATTGGCATATACCCACATCCTGGCAAGTAGCAA
AACCATTTTATGACGAGAAGGTAAAACCGGCCACATTAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCATCCCTCCT
TCACAATAAGCACAGCTCATTGGTAACTACAAGCTACTTCTTTTCCTTTTGGCCTGTTTTCTAGCAATACTCTATCGTGTTTATTATAATTTCAAATGAT
TTTGTCAACTCAGGCTGGACAGAGGGTAGTATTGTTCTCTTACGGGAGTGGATTGACTGCAACAATGTTCTCATTAAAGCTTCACGAAGGTCAACATCCT
TTTAACTTGTCAAACATCGCAACTGTGATGAACATTGAAGAGAAACTGAAGTCGAGGCATGAGGTATGATAAAATCGTCTTTATGATTTACTCACGGACA
TTGAACCCGTTGCCAACACTATGACAGTTGAGTACCATAACTCTCTTTGACAAACAATCTTTTGTGCAGTTCACTCCTGAAAATTTCATCGAAACTATGA
AGATAATGGAGCACAGGTACGGGGGTAAGGACTTTGTGACGAGCAAGGGATGCAGCCTTCTAGCTCCTGGGACGTACTATTCTACAAAAATTCGATTCTA
AGTACAAAG
>LE_HBa0238D24_SP6_398399 (trimmed for quality and cloning vector)
TTGTCTTTTTTCATTTTCTTTTCAATGGCTTCGTGTTCCTTTAAGGTATATGTTTAGAATGCTGAAAATGAAGCTTTCATTTTTAAGAATTGCCTTAACA
ATTATATATGTTGAGATTGGAATTAACTAGTGCATTATATCTATTGGCATATACCCACATCCTGGCAAGTAGCAAAACCATTTTATGACGAGAAGGTAAA
ACCGGCCACATTAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCATCCCTCCTTCACAATAAGCACAGCTCATTGGTA
ACTACAAGCTACTTCTTTTCCTTTTGGCCTGTTTTCTAGCAATACTCTATCGTGTTTATTATAATTTCAAATGATTTTGTCAACTCAGGCTGGACAGAGG
GTAGTATTGTTCTCTTACGGGAGTGGATTGACTGCAACAATGTTCTCATTAAAGCTTCACGAAGGTCAACATCCTTTTAACTTGTCAAACATCGCAACTG
TGATGAACATTGAAGAGAAACTGAAGTCGAGGCATGAGGTATGATAAAATCGTCTTTATGATTTACTCACGGACATTGAACCCGTTGCCAACACTATGAC
AGTTGAGTACCATAACTCTCTTTGACAAACAATCTTTTGTGCAGTTCACTCCTGAAAATTTCAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.961377
Expected error %
0.581948
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238D24
Clone
Clone name
hba-238d24
LE_HBa0238D24
P238D24
Clone type
BAC
Contamination
none
Estimated length
74,693
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found