Clone Read LE_HBa0222B13_SP6_398517

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222B13_SP6_398517
Primer
SP6
ID from Seq. Facility
LE_HBa_222_B13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
672 trimmed for vector and quality, 953 raw
Sequence
>LE_HBa0222B13_SP6_398517 (raw untrimmed)
NGTGTTAATCTTGTTCTCTCTCTGCACAGAATACTTATTAATTTTAGGAACACACTTTAGGCGGAGTTCCCAGTAGCTGTTAGATGCCTTAATAAGAAAC
CTTCTTGTCAAAGGATGCAAGTTGTTCTTGCTGAAACGATGGCTAAGACCAGGTCCCTTCCACCTTTTTTTGGATTTTTGTCAAATCTCACAAATTTAGT
ACAGTGAACAGGTGCCCATTCTTTCGTTTCTTGATTATTTTTGGATATAAGAAACCTCACATGCCTTTCTTTTGCTCCTTTCAGTTTATCACAATTCTCT
TTAAGGTGCCCATTACGTCCATAATGGGTACACAAAAGATTATCAGCTACAAACACATATTTGCTATTAGGATTAAATGGGGGTTCTATCGGTCTGCATC
CCAGCCCTTTCTTCCCATTGAAACTCTGTTGAGACAGGTCGGAGAGTATCTTGGAAGAGTCACTCCATTTTAGACAATGACTCATCTCTTCTATGATCCT
ACTCAGATCCTTTCTCAATTAAGAGTTAGTTAAAAGAGAAGAAAATAACTTAGTTTCAAAGATTCTAAGCTTGTATTCTAATTCTTTCTCAAAACACTAA
GTTTTCTTTTGTAATTTTCTGAAATGCTAGGCTCCTTTTCAATAGTAATGTTGCTATATTCCAACATCCTTATTCTGGCATTCATTTCAGTGCCTTGAGC
TAAAAGAGATGTATTTTTACCCTCACACAAAATTATTTTTTCATTTCACGTTAAAGTTTTCAGTAGTACTCTCATCCCTTGAAACAATTAGCAAAGCAGC
CAGTTTCCCTCAATTATCTTCTGGAAAATTATCTAGATCATCTTTTTAGTTCAAGAAAAGTTCCTCCATTGGAGTCCTTCACCATCATCAAATTTCCGCC
ATCAATGAAAAATTTGGAAGTTGAAAACCCCCCCCTAATCCTTCAAAAAAAAT
>LE_HBa0222B13_SP6_398517 (trimmed for quality and cloning vector)
ACTTATTAATTTTAGGAACACACTTTAGGCGGAGTTCCCAGTAGCTGTTAGATGCCTTAATAAGAAACCTTCTTGTCAAAGGATGCAAGTTGTTCTTGCT
GAAACGATGGCTAAGACCAGGTCCCTTCCACCTTTTTTTGGATTTTTGTCAAATCTCACAAATTTAGTACAGTGAACAGGTGCCCATTCTTTCGTTTCTT
GATTATTTTTGGATATAAGAAACCTCACATGCCTTTCTTTTGCTCCTTTCAGTTTATCACAATTCTCTTTAAGGTGCCCATTACGTCCATAATGGGTACA
CAAAAGATTATCAGCTACAAACACATATTTGCTATTAGGATTAAATGGGGGTTCTATCGGTCTGCATCCCAGCCCTTTCTTCCCATTGAAACTCTGTTGA
GACAGGTCGGAGAGTATCTTGGAAGAGTCACTCCATTTTAGACAATGACTCATCTCTTCTATGATCCTACTCAGATCCTTTCTCAATTAAGAGTTAGTTA
AAAGAGAAGAAAATAACTTAGTTTCAAAGATTCTAAGCTTGTATTCTAATTCTTTCTCAAAACACTAAGTTTTCTTTTGTAATTTTCTGAAATGCTAGGC
TCCTTTTCAATAGTAATGTTGCTATATTCCAACATCCTTATTCTGGCATTCATTTCAGTGCCTTGAGCTAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.945173
Expected error %
0.0374994
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222B13
Clone
Clone name
hba-222b13
LE_HBa0222B13
P222B13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found