Clone Read LE_HBa0238F22_T7_398584

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238F22_T7_398584
Primer
T7
ID from Seq. Facility
LE_HBa_238_F22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 798 raw
Sequence
>LE_HBa0238F22_T7_398584 (raw untrimmed)
TTCATAGAAAGGAGGCGAAGNANANNNNGAGAGNNNNNNNATTTCTAAAGAGGCTTCGGNNNGNANNNNNNGNGNAGAGNGGNNNANANNNAAAGNAGGG
GGNGNAGGGAGGAGTTTTCAAAAAAAGGCTCCNNANNNAGGAAAGNNNNNAGGGGGGAGAGGGAGAAGANNGGGGNGAAAAGGAAGAAAAGAAGGNAAAA
GAGAAAAAAAGGGAAGGGAGAAGAGAGGAAAGAGGGNAAGAGAAGAAGGGGGGAGGANAAAGAAGAGAAAGGAGAAAGAAAAAAAAAGAGAAAGAGAGGA
GGAGAAGGAAGGGGAGGAAAA
GGAGAGAAAGANAAGAAAGGGAAAAAAAGGAGGGGAGGGAAGAAGAAGAAGAGAGAGGAAGGGGAAAAAGAGAAAGGGT
AGAAAGGACCCCCCCCCACAAGAAGACGGCGAAACGGGACAAAAAAAAAGACAGGACAACAGCCGGAACCAGAGAAGAAACAAAGAGGCGCCAGAACAGG
AGAGCGCAGAGGAAGAAAGGCGAAAAAAAGGGCGACCAGCGCAGGGAGAGGCACAGAAGAAAAAAAAAAAAGGGCAACAAAGACACAGGAGGAGGGAAGA
AAGAACAGAAGGACGGGAAAGGAAGAACCAAGAAAGGAAGGGAAAAGAGAACGAGAGGAGGGAAGCAAGAGAGAAGGGAAGAAGAAAAGAGCGAGGAGAA
AAAGAAAAGGAGAGAAAGGAGAAAAGCAGAAAAGACAGAGAAGGAAGGAAAGAAAGGAAAGAGAAGAAGAGAGGGAGAAGGAGGAAAGGCCAGAAAGG
>LE_HBa0238F22_T7_398584 (trimmed for quality and cloning vector)
GGAGAGAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.729718
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238F22
Clone
Clone name
hba-238f22
LE_HBa0238F22
P238F22
Clone type
BAC
Contamination
none
Estimated length
104,137
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found