Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

Clone Read LE_HBa0238I13_SP6_398839

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238I13_SP6_398839
Primer
SP6
ID from Seq. Facility
LE_HBa_238_I13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
678 trimmed for vector and quality, 811 raw
Sequence
>LE_HBa0238I13_SP6_398839 (raw untrimmed)
GTTTGTTCGATTTCCATTGTGTCCACTGATTATAAGAAAAATATAAATGGGAGTATTTCTTGATAAATCCCGTAGCTAAGGGTGGGATCGTTAGACTTGA
TGCACCTTGTAATTACCGATTGCCTATATAGCCCTTGATAGTGGGAAGGTAGAACTAGTATACTGTTACTGATATCCCTCATGTAGTGATAAATCGATAA
TATTTAACTTCTTTATGAGGAGTTCACTGTTATAGGTTGCTTCGTAAAGAGAAGTCACAGTGATTACATGATTCATCCTTGGAAACCTCTCAACTATAAG
ATTTGATATATAAATGTTTTCTGAGTTTACTATTAAGTGCTTACATTAATTTTTCTTACATGAGGCACATGAGATGGATATTAATATGATTTCTGAAAAA
ACATTACTTCACCAATTGATTATCATACTAGCATGTTTTCTGACCTGTCCCTCATTAAAATTATTGTGGTTAAGTATTAGTACTCATTGAGCTAGCTTCT
CACTCCTAGCTATATTTTTTTTACACAGAATACATTTGACTTAGATAAGGTCTAGAGCTTTCAAGTTGATAATTTCCGGTGAGCCCTGCACTTGTTCGCG
TGGATGACAAACTTATTAGTTGTTATAGACATTTGTTCTCCATAATCATTTCTTTTATTAGAAGTTATGAGTATTCTTTCGTATTGTAAACTGGTGCCTA
GTATGATACTTATGTTTTGGAGTTGGAATTAGTATTTTACTCTTCGAATAGTTTATTGATGAATAAGGTGGGGAAAAGAAGACATTGGTTGGCTGTGTTA
TTTGATTTTTG
>LE_HBa0238I13_SP6_398839 (trimmed for quality and cloning vector)
CCACTGATTATAAGAAAAATATAAATGGGAGTATTTCTTGATAAATCCCGTAGCTAAGGGTGGGATCGTTAGACTTGATGCACCTTGTAATTACCGATTG
CCTATATAGCCCTTGATAGTGGGAAGGTAGAACTAGTATACTGTTACTGATATCCCTCATGTAGTGATAAATCGATAATATTTAACTTCTTTATGAGGAG
TTCACTGTTATAGGTTGCTTCGTAAAGAGAAGTCACAGTGATTACATGATTCATCCTTGGAAACCTCTCAACTATAAGATTTGATATATAAATGTTTTCT
GAGTTTACTATTAAGTGCTTACATTAATTTTTCTTACATGAGGCACATGAGATGGATATTAATATGATTTCTGAAAAAACATTACTTCACCAATTGATTA
TCATACTAGCATGTTTTCTGACCTGTCCCTCATTAAAATTATTGTGGTTAAGTATTAGTACTCATTGAGCTAGCTTCTCACTCCTAGCTATATTTTTTTT
ACACAGAATACATTTGACTTAGATAAGGTCTAGAGCTTTCAAGTTGATAATTTCCGGTGAGCCCTGCACTTGTTCGCGTGGATGACAAACTTATTAGTTG
TTATAGACATTTGTTCTCCATAATCATTTCTTTTATTAGAAGTTATGAGTATTCTTTCGTATTGTAAACTGGTGCCTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.95097
Expected error %
0.35305
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238I13
Clone
Clone name
hba-238i13
LE_HBa0238I13
P238I13
Clone type
BAC
Contamination
none
Estimated length
101,363
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found