Clone Read LE_HBa0222I23_T7_399223

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222I23_T7_399223
Primer
T7
ID from Seq. Facility
LE_HBa_222_I23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 938 raw
Sequence
>LE_HBa0222I23_T7_399223 (raw untrimmed)
ATGGACGGGGACTCTGAGTCGACCTGCAGGCATGCAAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTG
TGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAT
TGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGAACCCCTTGCGGCCGCCCGGGCCGTC
GACCAATTCTCATGTTTGACAGCTTATCATCGAATTTCTGCCATTCATCCGCTTATTATCACTTATTCAGGCGTAGCAACCAGGCGTTTAAGGGCACCAA
TAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCAT
GATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCAC
GTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAAACCTTTTAGGGAAATAGGCCAGGTTTTTCACCGT
AACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCCGAAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAA
CGGTGTAACAGGGTGAACACCATCCCCTATCACCAGCTCACCGTCCTTTATTTGCCATACGAAATTCGGGATGAAGCTTTCTTCCGGCCGGGCAAAAAAG
GGTAATAAAAGGGCCGGAAAAAAAACTTGGGCTTATTT
>LE_HBa0222I23_T7_399223 (trimmed for quality and cloning vector)
CTGCAGGCATGCA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, short insert
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
0.946404
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222I23
Clone
Clone name
hba-222i23
LE_HBa0222I23
C06HBa0222I23
P222I23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found