Clone Read LE_HBa0238M21_SP6_399259

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238M21_SP6_399259
Primer
SP6
ID from Seq. Facility
LE_HBa_238_M21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
495 trimmed for vector and quality, 861 raw
Sequence
>LE_HBa0238M21_SP6_399259 (raw untrimmed)
NNTTCGATGCNAAANNGGATCATTTCTCACCTCAAGATAAGGGTAACGTCGACATACTGTCGACACCCTTTTAGGAAGAAAGAAAAAAGNCGGCGACAGC
AGGGGTCTCCTTTTAAGG
GGCGAAGCCCAACAGATTNCAAGTCTGTCTCCTTAACCACTCGGACATATCGACATTTTCGTTGCTTCTCTATAGTTTAAAT
ATTATTATTAATTCATTCTTTGTTATAAAATAATATAATATTAATCAACTAACACATTTAATCAAATGATGAAAAATAATAACTGAAAAGAATGAGTAGT
AGCGATGACTGAAATAATACCCTATTAATAATATAATATTACATATTTGATGAGATGTCGTTAATTCAAATACTCATTATTACTTTTTAGAAAATGCATA
ATGCCTTTTTTTTTTAAGAANAAACNCGCAAGCAGGTTAGTGGGGCGAAAACGAAACACAGCTATTTATTATTCCATTCTAGTTAATTCATTTTTTTTAA
AAAAAATAATAATTCAAAACTATACTAAAAAATCATAAAAGATAGGTTAGATTTAGTCTTTTATATTCAATCTGAATAAAAATAAAACGATTAGTTCGAT
TATATATAATGATTTTTCTTCACGTGTATATTGAACTAGTTGACGTAAATATTTTTTGCTTGTGCAATAAATTGGAGCAGGTCATGTTTGACAGAGTGAA
GAATGAGGGATGGCCACATCCAAATGACAAATTTTTAGTTGCAAAAGTTCAAAAAAAAAAAATACCCACCTATGGGGGTAGGGGGGGGAAAAAAACTAAT
TAAGGGACCGGAATTTAATTTGAATTTTATTACTTTTTTGAAGGGTAGTTTACTTTTAAGG
>LE_HBa0238M21_SP6_399259 (trimmed for quality and cloning vector)
GGCGAAGCCCAACAGATTNCAAGTCTGTCTCCTTAACCACTCGGACATATCGACATTTTCGTTGCTTCTCTATAGTTTAAATATTATTATTAATTCATTC
TTTGTTATAAAATAATATAATATTAATCAACTAACACATTTAATCAAATGATGAAAAATAATAACTGAAAAGAATGAGTAGTAGCGATGACTGAAATAAT
ACCCTATTAATAATATAATATTACATATTTGATGAGATGTCGTTAATTCAAATACTCATTATTACTTTTTAGAAAATGCATAATGCCTTTTTTTTTTAAG
AANAAACNCGCAAGCAGGTTAGTGGGGCGAAAACGAAACACAGCTATTTATTATTCCATTCTAGTTAATTCATTTTTTTTAAAAAAAATAATAATTCAAA
ACTATACTAAAAAATCATAAAAGATAGGTTAGATTTAGTCTTTTATATTCAATCTGAATAAAAATAAAACGATTAGTTCGATTATATATAATGAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.911085
Expected error %
2.9197
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238M21
Clone
Clone name
hba-238m21
LE_HBa0238M21
P238M21
Clone type
BAC
Contamination
none
Estimated length
86,204
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found