Clone Read LE_HBa0238M21_T7_399261

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238M21_T7_399261
Primer
T7
ID from Seq. Facility
LE_HBa_238_M21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
21 trimmed for vector and quality, 873 raw
Sequence
>LE_HBa0238M21_T7_399261 (raw untrimmed)
NNNCTGCCTAAGCGCTCNACGGCCGNAGTGTGATGGATATCTGCAGAATTCGCCCTTGAGGCAAGCGCCTGAGGGGCCCCCGCAAGCCAAGGGGAAGCAG
GGAAGTACTTTGCTTGCGGCGAAGGCACCCAGCGCACGGGTAACTCACACCCATGGAGCGAGCGGCGGAGTCTAGAACACCCTGCAAAATGGACTATGAA
GACAAGCATGAGTCCCTAGAATTACATGTTCCCACTAATAGGAGTCCACCTGCAGACTACGGGCAGGACTACCATCACAATCTGGGAGGGTATCCCCCCC
ACCGATTGGTCGAGCGCTAGGGGTACTGAGATAAAAGCCCTGAATTCGAAGACCGAAGGGCCATGATGACTCTGACGGCATCCCCCCCTTCATCAAATTG
GTCAACGGCACTCGCACCAGAGTGCCCCATCATAGCGCAGGAGAACTGCCCTGTGGGTAGAAGACCTGCTTTATGAAGGATCACACGAAGGCACCTGAAC
ACGTCCGCGCGCCATCTGTGAACAAGGAAACTTCCGAGCGCTGCCCGAACTCGCGAGGATACCTGGGATGCCACGGGTAGGTGAAGATTTTCGCGTTACA
AGGAATGAAGCGGGCTAATCAAACGCGTGTGCGGGTCAACAACAATTCCTTCGAATTGGAAACTTGATAAAGAAATCCCTCAACGGAGCCCACGCATGAC
ATAACTGGTGTCCAAATTTGAATGTGCCCCAAACAACCCGGTAAAACTCGGTATAAGGGGGAAAAAACACAACGCACGAGAACCCACGTTGTGCACCCCA
CCGGTTAAGAAGCCCGAACAGTAGCGAAATTCTCCGGGGGACATGGCCCCCCGGACGGTATGTGCCCCACTTC
>LE_HBa0238M21_T7_399261 (trimmed for quality and cloning vector)
TGGATATCTGCAGAATTCGCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.10256
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238M21
Clone
Clone name
hba-238m21
LE_HBa0238M21
P238M21
Clone type
BAC
Contamination
none
Estimated length
86,204
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found