Clone Read LE_HBa0239A04_SP6_399561

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239A04_SP6_399561
Primer
SP6
ID from Seq. Facility
LE_HBa_239_A04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
731 trimmed for vector and quality, 953 raw
Sequence
>LE_HBa0239A04_SP6_399561 (raw untrimmed)
TCAAGCTCTATTTTTGTCCATACATAATATTACAATATTATCTCATAGGAAGTGTAGGATACGTCTCACATTATATCATCTAGAACGAATACAACACTTC
CTTATAACCCAAACTTTATTACAACAAAAAGCCTCATTTAAGCTTATACAACTGTCGTCTGCAAATGAAAAGGAAAAAACTAAAAAATCTTCTGACTAGA
ACAACATCAAAATCTTGATAGTTTCATTGCCCTCAAAAAAATGAGGACCTATAAAAAATTGGATAAGGATAATCCAAATATTTTTCAATGGCCTTTTATA
TGGTTAATAGATATTCTTTACATATTTGTAGTAACATAGAAAATGGGTTAGCACATCACATGTAGTAAGTATGGAAATATAGAAAAAATAGTTCAAATCA
TGATAAATGGGACTTTTTTTTAAAAGCATATTAGGTTACTCTGAAATGCCTTATGCACAATCAAGAACCCATATAAGCCAATCTTCACACAATTCCAAAG
TTAAGGTAACGTACAACACAAGAAAAACATTATAAGGTACATAACTAAAACAAGTCAAACATCATGTTATAAGAACTAAGCATGTATAAAAGTTCATAAC
ATAGAACATATTCAAGAACCTCACTCATAAGAAACCATCAAATCCACAAGTGTGATTACCAAGTAAGGTCCCATAACCTCACTCAACCAAATAACAAAAA
AAGGATCATAAGTAATGCCTAACTTAACCTACATATTATCAATAGTAATCATCCTCATATAGTATCATCAACTTTAAAAATAAACATATGCGTAACATTT
ACTCTATAAGGTAATAAAACCAACCTTCTAGCACTTCCCCAAGGCCCACTAGTCCAATGTAAAGGTAGAGTCCCTTACCACTACCTAAACTAAGTCAAAA
CCTTTAGTAACCCTATTAAAGGTTCTATTATAACTTCATTTTACTTTTGACAA
>LE_HBa0239A04_SP6_399561 (trimmed for quality and cloning vector)
CATACATAATATTACAATATTATCTCATAGGAAGTGTAGGATACGTCTCACATTATATCATCTAGAACGAATACAACACTTCCTTATAACCCAAACTTTA
TTACAACAAAAAGCCTCATTTAAGCTTATACAACTGTCGTCTGCAAATGAAAAGGAAAAAACTAAAAAATCTTCTGACTAGAACAACATCAAAATCTTGA
TAGTTTCATTGCCCTCAAAAAAATGAGGACCTATAAAAAATTGGATAAGGATAATCCAAATATTTTTCAATGGCCTTTTATATGGTTAATAGATATTCTT
TACATATTTGTAGTAACATAGAAAATGGGTTAGCACATCACATGTAGTAAGTATGGAAATATAGAAAAAATAGTTCAAATCATGATAAATGGGACTTTTT
TTTAAAAGCATATTAGGTTACTCTGAAATGCCTTATGCACAATCAAGAACCCATATAAGCCAATCTTCACACAATTCCAAAGTTAAGGTAACGTACAACA
CAAGAAAAACATTATAAGGTACATAACTAAAACAAGTCAAACATCATGTTATAAGAACTAAGCATGTATAAAAGTTCATAACATAGAACATATTCAAGAA
CCTCACTCATAAGAAACCATCAAATCCACAAGTGTGATTACCAAGTAAGGTCCCATAACCTCACTCAACCAAATAACAAAAAAAGGATCATAAGTAATGC
CTAACTTAACCTACATATTATCAATAGTAAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.910518
Expected error %
0.221581
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239A04
Clone
Clone name
hba-239a4
LE_HBa0239A04
P239A04
Clone type
BAC
Contamination
none
Estimated length
96,706
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found