Clone Read LE_HBa0239A23_SP6_399634

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239A23_SP6_399634
Primer
SP6
ID from Seq. Facility
LE_HBa_239_A23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
169 trimmed for vector and quality, 1231 raw
Sequence
>LE_HBa0239A23_SP6_399634 (raw untrimmed)
GCTTGTTTGTAGCATCCTTTCCCTCGGTCTGAACATTCAAATGGGAACATTCTGGCTTAGTTCAAGGTTCTTCAATTGGGTATAGCAATGGAAGAGAATC
CCTTTGACAAATCGACGGTAATAGCTCGCTAAACC
AAAAAAGCTCCTTATTTATGACACATTAGTAGGTCTTACCCAATTTTTCAGTGTCTCAATCTTAG
AAGGATCCACCATCACTCCATTTCTTAAACACCACGTGCCCCAAAGAAGGACACTGAATCTTGCCAAAACTCACACTTGGAGAATTTGGCATAAAGCTTT
TTCTCCCTCAACATTTCCAATACCTTTCTCAAATGCTCTTCGTTCTTTCTTGCTCTTTGAGTATATCAGTTAATCATCAATAAATACGGATCCCAAGAGA
TCCCGAATTGGGTTAAAAATTCAAATTTAAAAAGCTCATGAAAACAGGCGGGGGTCTTTCTTTATCCAAAAAAGAATTTCCCTTCAAATTCCGTAAAGGC
CCATTCCCTGGCCCCAAAAAGCAATTCTTTGGGCACAACCTTGTTGCCCCGAATTTTTAATTTGGAGAAAAACCCGGATCTTTAATGTTATATTTAAAAA
AAAAAAAAAAAGGCACTTTTGTTATTGGTATTCAAACTAAGTTTTCTAATGTCAAGGAAAGGGGGAAATTGGTTTTTCTAAAAGGTGTACACTTTGGTAA
ACTGGCCGGGAGATTTTATTCACTTCTCGGAAAAACTCCCCCTTTTTTTTTTCTTTATAATTATAACACTGGAAACCCCCCAGAAGGAAACCCTTTTGGT
CAAAATAGAAAATTTTTTTTCAAAAAACATTTTAAAGGGGGGGCGCTTTAATTCTCTTAAAAACCCCGGGGAAATTATTTTTAAAGGGGGGATTAAAAAA
ATGGGCGAGTAAACTCTTTTCTAAAAGTGTTGATTATTATAATTGTTTTTGCTGGGTGGTGCTAACATGGTGGGTTTGGGAAAAAATCATTTTATAATAT
TTGTATATTTTTATAATCACATCTTCATTAAAATGTTTTTTTGGTGTTTGTTCCCCTGAGGTTTATTATAACAGTAACACTCCCTTTTCATATTTATTTT
CTCTGCGGTTGAATAGGAGATATCTTCTTTGTGGAGTATTGTCTTCTCATCAAAATTTCTTTATTTCACCCTCGTACGAATCTGATTTGGATGTGTACAT
GACATGTAGATTTTGAGCTTAATTCTTTCTC
>LE_HBa0239A23_SP6_399634 (trimmed for quality and cloning vector)
AAAAAAGCTCCTTATTTATGACACATTAGTAGGTCTTACCCAATTTTTCAGTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTTCTTAAACACCAC
GTGCCCCAAAGAAGGACACTGAATCTTGCCAAAACTCACACTTGGAGAATTTGGCATAAAGCTTTTTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.929113
Expected error %
1.03528
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239A23
Clone
Clone name
hba-239a23
LE_HBa0239A23
P239A23
Clone type
BAC
Contamination
none
Estimated length
89,081
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found