Clone Read LE_HBa0239D11_SP6_399871

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239D11_SP6_399871
Primer
SP6
ID from Seq. Facility
LE_HBa_239_D11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
631 trimmed for vector and quality, 966 raw
Sequence
>LE_HBa0239D11_SP6_399871 (raw untrimmed)
TTCTTCATGTTGAAGAACCGAACCATCTCGGGTGCAAACATGAATAAATTTAGGGAAAAAGGATTAGGGAGAATGAAGCTTTAAAGAATTTGACAATGGG
CTACGGTTGCACACAGAAGTTCTAAAATGATAATTAAGTTCTATTCATCTGCGTGCACATCGTGAGTTCCCTTGCCAATTGAGTCCCAACTAATAATTTT
GCTGGCAATTGCATCCGTTTTGTCAAAAAAAAAATTAACTGCGCCCCCAGGGCTTAATTCAAGTGACAAAGATTGAGAGTCTTGTGAGTTGTGACTTAGG
TCACAGGCGCGACCCCTACATCATTTGAACTAAGTTTGATATCTAAGTAGAGTAGGGTAGATTTGTGATGCCCACTATTCCCGAGTTCTGAAGGACATTT
GGTCCTACAGGTTGGCCCCAAATGGATTTCTTGGTCATCCAAAAAAAAAGGCAGTAATTGCACATAGCGGAAGTGATAGGTTATGGGGGAAACTGCTGGG
TTCTCCCTTCTGTTCCCTGTTTCACCCCCATGCCTGTATGTCAGTCTCCTGGGGAAGAAACTTGCTGTTTCCCTTCCCATTGCCGTCTCTGTTGTGAGTC
TAACCTTTTCATGCTCTTCTGCTTCACAGGAAGCTGGTGTTGAAGTTGATCCTCTTGGGGACCTAAATACAAAATTCAAAAGAAAGCTTGGGCAGCTTTG
TTGCGGAAAAATTTTTAATACCTCCCTCTACCAAATCACAAAAATTCTCTTCTTCCAAATTCAACCTTTTTCGTTCTTTTCTTCCCAAAATTGAATGAAG
GGTCATGGTGTAAATTTATCTGTTCATTATTTTATCTCTCCAGATAAGGAACTGAATTTTCTTAATACTTTATATACATATCCATCAGGTTGGTTTTAAT
CCTTTATAATAGCCTATGCTCATTGTTTTTAATCAATACTATTTTTTATATCGAAATTTCTCTTTG
>LE_HBa0239D11_SP6_399871 (trimmed for quality and cloning vector)
TGTTGAAGAACCGAACCATCTCGGGTGCAAACATGAATAAATTTAGGGAAAAAGGATTAGGGAGAATGAAGCTTTAAAGAATTTGACAATGGGCTACGGT
TGCACACAGAAGTTCTAAAATGATAATTAAGTTCTATTCATCTGCGTGCACATCGTGAGTTCCCTTGCCAATTGAGTCCCAACTAATAATTTTGCTGGCA
ATTGCATCCGTTTTGTCAAAAAAAAAATTAACTGCGCCCCCAGGGCTTAATTCAAGTGACAAAGATTGAGAGTCTTGTGAGTTGTGACTTAGGTCACAGG
CGCGACCCCTACATCATTTGAACTAAGTTTGATATCTAAGTAGAGTAGGGTAGATTTGTGATGCCCACTATTCCCGAGTTCTGAAGGACATTTGGTCCTA
CAGGTTGGCCCCAAATGGATTTCTTGGTCATCCAAAAAAAAAGGCAGTAATTGCACATAGCGGAAGTGATAGGTTATGGGGGAAACTGCTGGGTTCTCCC
TTCTGTTCCCTGTTTCACCCCCATGCCTGTATGTCAGTCTCCTGGGGAAGAAACTTGCTGTTTCCCTTCCCATTGCCGTCTCTGTTGTGAGTCTAACCTT
TTCATGCTCTTCTGCTTCACAGGAAGCTGGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.977381
Expected error %
0.707078
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239D11
Clone
Clone name
hba-239d11
LE_HBa0239D11
C05HBa0239D11
P239D11
Clone type
BAC
Contamination
none
Estimated length
114,794
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found