Clone Read LE_HBa0239D11_T7_399873

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239D11_T7_399873
Primer
T7
ID from Seq. Facility
LE_HBa_239_D11-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
691 trimmed for vector and quality, 891 raw
Sequence
>LE_HBa0239D11_T7_399873 (raw untrimmed)
NNNNATACGACGGGGACTCTGAGTGACCTGCAGGCATGCAAGCTTTTTAGTTGTGATCTTCATGTCCCTTTCGAGAGCTTTTCAATTTTTGAAAACTTGC
ATCTGATCCATACTAATGTTCTAACTTTTGGCTTTACGATTTTGGTCAATCTTTGCTCATTATAACTGTGTCTTTCCTGCTTTTAGATGACAATGAATTT
GAGGAAGTGAATATCGTGAAACCAAATGATGAATTTTAGCAGCCTCACGATTCAGATGGTGGTGCAAATTGGTGACAACGTACATTCTGGCAACATCTAA
TCCTCAACAAATATCTGTATACTTGTAAACTGGGAATTGATTGACCTGCATCTGGTTCTTCTAAAATACTCAGATAGCCTTGAGTTTCATGCTGTAGGGA
AGTTTGTGATATCATTGCGGTTCTGTTTAGCATTATACTGTTCAAGAGAACCACTTCTTATGATTTTTGCAACGATGAGAGCTCTGAGTTACATATACAG
ACATAATACATCAACTTTTTTTTAGTAGGATTAGACTTTTCATGGATGTATGAGAATTGCTGGCTTAAGTGTGATTTGTCATGTTCCTTTATCTTCTTGG
TTGCATGACCACTCCCACCTCCTTTTTCCACCGCGGGTTGTTCAAAATCGAACCAAAATGGTGCTATTGATTTACTAGTATTTGGTAACAATCTGGAATT
CTGCATTAACCACTCCTCTTCCCTAAACATTTTTGGGTAGTATGTAGGGACAGGTTCTAATCTTACAAATATTAGTCAGACTCTTAGATCTTGCAATTCA
CCTTTAACCTAAGGTATCAGGTTTAAACCTCCAGAATATATACCCCTTCGGGGGTTATACCAAACTAAAGGATAAATTGATGTGGTATCTC
>LE_HBa0239D11_T7_399873 (trimmed for quality and cloning vector)
CCTGCAGGCATGCAAGCTTTTTAGTTGTGATCTTCATGTCCCTTTCGAGAGCTTTTCAATTTTTGAAAACTTGCATCTGATCCATACTAATGTTCTAACT
TTTGGCTTTACGATTTTGGTCAATCTTTGCTCATTATAACTGTGTCTTTCCTGCTTTTAGATGACAATGAATTTGAGGAAGTGAATATCGTGAAACCAAA
TGATGAATTTTAGCAGCCTCACGATTCAGATGGTGGTGCAAATTGGTGACAACGTACATTCTGGCAACATCTAATCCTCAACAAATATCTGTATACTTGT
AAACTGGGAATTGATTGACCTGCATCTGGTTCTTCTAAAATACTCAGATAGCCTTGAGTTTCATGCTGTAGGGAAGTTTGTGATATCATTGCGGTTCTGT
TTAGCATTATACTGTTCAAGAGAACCACTTCTTATGATTTTTGCAACGATGAGAGCTCTGAGTTACATATACAGACATAATACATCAACTTTTTTTTAGT
AGGATTAGACTTTTCATGGATGTATGAGAATTGCTGGCTTAAGTGTGATTTGTCATGTTCCTTTATCTTCTTGGTTGCATGACCACTCCCACCTCCTTTT
TCCACCGCGGGTTGTTCAAAATCGAACCAAAATGGTGCTATTGATTTACTAGTATTTGGTAACAATCTGGAATTCTGCATTAACCACTCCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954214
Expected error %
0.430508
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239D11
Clone
Clone name
hba-239d11
LE_HBa0239D11
C05HBa0239D11
P239D11
Clone type
BAC
Contamination
none
Estimated length
114,794
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found