Clone Read LE_HBa0239G21_T7_400185

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239G21_T7_400185
Primer
T7
ID from Seq. Facility
LE_HBa_239_G21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
705 trimmed for vector and quality, 842 raw
Sequence
>LE_HBa0239G21_T7_400185 (raw untrimmed)
NNNGGTACGTCGGGNTCTCAGAGTCACNGCAGGCATGCAAGCTTTCAGAAGCTCAGACTTTGTTCATTTCCGCACCTATCCTTACCTTGCCAGTAGAGGG
TAAGAACTTTATTGTTTATTGTGATGCATCCAATTCTGGTTTGCGTGCAGTACTAATGCAAGAGAAGAGTGTGATTGCTTATGCTTCAAGGCAACTAAAG
GTGCATGAACGTAACTATCCGACCCACGATTTGGAATTGGCTGCGGTGGTGTTTGCATTAAAGCAATGGAGACACTATTTATATGGGGTTAAGTGTGAGA
TCTATACGGATCATCGTAGCCTACAGTATGTCTTTACTCAGAAAGATTTGAACTTGAGACAGAGGAGATGGATGGAACTACTGAAGGACTACGACATCAC
TATTTTGTATCATCCGGGGAAGGCGAATGTTGTAGCGGATGCTTTAAGTAGAAAGGTGGGAAGCATGGGAAGTCTAGCTCACTTGCAAGCTTCTAGGCGC
CCATTGGCTAGAGAAGTTCGAATTCTGGCTAACGACCTTATGAGGTTAGAAGTAAATGAGAAGGGAGGATTGTTGGCTTGTGTGGAAGCAAGATCTTCCT
TTCTTGACAAGATTAAGGGAAAACAGTTTGATGATGAGAAACTAAGAAGAATCCAAGATAAGGTATTGCGAAGAGAGGCTAAGGAAGCACAAATCGATGA
GGAAGGTGTTTTGAGAATCAAAGGAAGGGTATGTGTGCTCCGTGTTGATGATTTGATCAACACTATTCTGACCGAAGCTCATAGTTCAGGGTATTCTATA
CATTCGGGTGCAACCAAAAAGTATCGTGACCTAAAACACACN
>LE_HBa0239G21_T7_400185 (trimmed for quality and cloning vector)
AGGCATGCAAGCTTTCAGAAGCTCAGACTTTGTTCATTTCCGCACCTATCCTTACCTTGCCAGTAGAGGGTAAGAACTTTATTGTTTATTGTGATGCATC
CAATTCTGGTTTGCGTGCAGTACTAATGCAAGAGAAGAGTGTGATTGCTTATGCTTCAAGGCAACTAAAGGTGCATGAACGTAACTATCCGACCCACGAT
TTGGAATTGGCTGCGGTGGTGTTTGCATTAAAGCAATGGAGACACTATTTATATGGGGTTAAGTGTGAGATCTATACGGATCATCGTAGCCTACAGTATG
TCTTTACTCAGAAAGATTTGAACTTGAGACAGAGGAGATGGATGGAACTACTGAAGGACTACGACATCACTATTTTGTATCATCCGGGGAAGGCGAATGT
TGTAGCGGATGCTTTAAGTAGAAAGGTGGGAAGCATGGGAAGTCTAGCTCACTTGCAAGCTTCTAGGCGCCCATTGGCTAGAGAAGTTCGAATTCTGGCT
AACGACCTTATGAGGTTAGAAGTAAATGAGAAGGGAGGATTGTTGGCTTGTGTGGAAGCAAGATCTTCCTTTCTTGACAAGATTAAGGGAAAACAGTTTG
ATGATGAGAAACTAAGAAGAATCCAAGATAAGGTATTGCGAAGAGAGGCTAAGGAAGCACAAATCGATGAGGAAGGTGTTTTGAGAATCAAAGGAAGGGT
ATGTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.968243
Expected error %
0.349124
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239G21
Clone
Clone name
hba-239g21
LE_HBa0239G21
C08HBa0239G21
P239G21
Clone type
BAC
Contamination
none
Estimated length
112,626
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found