Clone Read LE_HBa0239I22_SP6_400371

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239I22_SP6_400371
Primer
SP6
ID from Seq. Facility
LE_HBa_239_I22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
591 trimmed for vector and quality, 970 raw
Sequence
>LE_HBa0239I22_SP6_400371 (raw untrimmed)
GCTACACGGGAAAGTTGGCCTAGCTCCACTCCGCATGTAAATTTTTGAATTCAGGATGACATCTTCAACCTGCCATTAATAACAGAGCAATCAGAATAAT
ATTTCACTGATGGACAGATATCGAGTATTAGCATAACTACAGATCAGCTTGGCAACTGCAATAGTTTACCTACAAATTTCCAACCAATTCCGTTAGCAGA
GAAAAGAAATGCTTATCGCATCCAGGAGAATAAAAAATAATTAGAAGCGCAAAATACAACACCACGCTATATTCCCTTTAACTTCCATTATTCCAGTACA
TGTGACATCAGTTGACACTGTTTGACTGAACACAGAACTTAAGGTGCAAATTGAACTTGTGATTTGCGCAAACAAACAGCCCCTTAGATATTTTATCCAA
TAATCTTTTGATTCAGCATTTAAAATTTTCTGACTTATGCAAGCATCATGTGAATGTATACCAAGGGAGATCATAAGTGGAATTAATGAGAAGTTCCTCA
CCGCACTTGGCATGCTAATTGTATAATTACAAATGAATTTTGAGATGTCTTTTGCTCCAATACCTGCTTTGAGAGAGGCTATATTAGGATGCGTGAAGCC
GTGAATGGAATATAAGTTGAAGAGATAAGGACACTTTGTTAATCAATAAGATTACCATAGAAGTAAAAGATCTTCTAACAGCAACAGAAAAAGGAAAATC
TTCAGTTTCCTTATAACTGATGCCAATACTCACACATTTTTCCCTATACAGTAATTTTTATTTCTTTTTTTAACCGTAATAGCAATAATCAGTTTGGCAG
AATCAAATAAATAATCCTTTCAAGAATGTATTGGGGACAAAATACCGTCTTACAGGTCCCCCTTTTGAGTTAAAACAATCTGGGCAAACCTTCACTTTTA
AAGGTCCCCCAATGCAATTTAAAAAACAATTTGGGCTTAAAATTGGGGGCCCTTTGATTGGTGAAATTAC
>LE_HBa0239I22_SP6_400371 (trimmed for quality and cloning vector)
ACTCCGCATGTAAATTTTTGAATTCAGGATGACATCTTCAACCTGCCATTAATAACAGAGCAATCAGAATAATATTTCACTGATGGACAGATATCGAGTA
TTAGCATAACTACAGATCAGCTTGGCAACTGCAATAGTTTACCTACAAATTTCCAACCAATTCCGTTAGCAGAGAAAAGAAATGCTTATCGCATCCAGGA
GAATAAAAAATAATTAGAAGCGCAAAATACAACACCACGCTATATTCCCTTTAACTTCCATTATTCCAGTACATGTGACATCAGTTGACACTGTTTGACT
GAACACAGAACTTAAGGTGCAAATTGAACTTGTGATTTGCGCAAACAAACAGCCCCTTAGATATTTTATCCAATAATCTTTTGATTCAGCATTTAAAATT
TTCTGACTTATGCAAGCATCATGTGAATGTATACCAAGGGAGATCATAAGTGGAATTAATGAGAAGTTCCTCACCGCACTTGGCATGCTAATTGTATAAT
TACAAATGAATTTTGAGATGTCTTTTGCTCCAATACCTGCTTTGAGAGAGGCTATATTAGGATGCGTGAAGCCGTGAATGGAATATAAGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.956147
Expected error %
0.211104
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239I22
Clone
Clone name
hba-239i22
LE_HBa0239I22
P239I22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found