Clone Read LE_HBa0239M09_SP6_400697

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239M09_SP6_400697
Primer
SP6
ID from Seq. Facility
LE_HBa_239_M09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
432 trimmed for vector and quality, 1003 raw
Sequence
>LE_HBa0239M09_SP6_400697 (raw untrimmed)
ACTAGCTTATAAACCCTTTTATTACTCATGGCGTGACACTACCTAGTCATAAGATAAAGATAACAACTTAATTTTTCACTTTTCCACCAAAATGGAGAAT
TAGTTAATCTAATTACTTTAACTATAAAATTATTTCAACAAAATTAAAATTTAAATAAAGTGAATTGAAATATCGTCTAGGTATCAAATATCGACATTGA
CCCATCAATTTTTTTATTTATTTTTTATCAAACTGTTCGTGGGTCTTGTGGTTAAGGTGTCAACTTTTGTCCAAGACGAGAATCGCCATTAGAAGACTTG
AATGATATTCATAAAGTCTGTCTTACAAAATCGAAGGGAGGACACATTTTTGCGTGGTTATTTGATTTCTTATATAGAAAAAAAAAATTGATAGTATTTC
TCATAAACATATAAGGCATGTTTTGAACATAAAAACTCATCGATAAAAATTATAATAATATACTTGAAATTGAGTTAAATAATATGATATGAATCAATTT
TTTATAATATAATATAATTACATTGACTTATCCATTTTTTTTTAAAACAAGAGTTGCCTATTAAAAGTAGTGGTCTAAAACCAATATTTAATGAAAGACC
TATAAAGGCTTTCTTTTTTTTCCAAATTAATTTTTGGAAAGATATTAATCATTTGGTTTGCAAAACAATCTGGTAGAAAAAATTGGATCAAAGTTTATTT
CCAAAAAGAAGAATCCAAGTGGTTTATTTTAATTTTTAAAAAATTTATCTAACTAAAAAGCGTAAAAAATTTTCTCCTAATTTAAAAATTTAATTAAGGA
AGCCGAATTCTTGGCCCTTAAATAGGGAAATTAATTAAAATTTTCCTTGGGGGGATTTCACTAAAAAATTTAACTACTAGTTATTATCCTCTCCCCTTCT
TTTTTAAACCTTAAACTTGATTTTAAATATAATAAAATTTTTTTTAATTTTTGAGTTTTTTCCCGCAAATGATAACCCTGTCTTTTACATTTTAATTCCC
GGA
>LE_HBa0239M09_SP6_400697 (trimmed for quality and cloning vector)
GACACTACCTAGTCATAAGATAAAGATAACAACTTAATTTTTCACTTTTCCACCAAAATGGAGAATTAGTTAATCTAATTACTTTAACTATAAAATTATT
TCAACAAAATTAAAATTTAAATAAAGTGAATTGAAATATCGTCTAGGTATCAAATATCGACATTGACCCATCAATTTTTTTATTTATTTTTTATCAAACT
GTTCGTGGGTCTTGTGGTTAAGGTGTCAACTTTTGTCCAAGACGAGAATCGCCATTAGAAGACTTGAATGATATTCATAAAGTCTGTCTTACAAAATCGA
AGGGAGGACACATTTTTGCGTGGTTATTTGATTTCTTATATAGAAAAAAAAAATTGATAGTATTTCTCATAAACATATAAGGCATGTTTTGAACATAAAA
ACTCATCGATAAAAATTATAATAATATACTTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.910685
Expected error %
0.688394
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239M09
Clone
Clone name
hba-239m9
LE_HBa0239M09
P239M09
Clone type
BAC
Contamination
none
Estimated length
18,832
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found