Clone Read LE_HBa0223M05_SP6_401122

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223M05_SP6_401122
Primer
SP6
ID from Seq. Facility
LE_HBa_223_M05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
691 trimmed for vector and quality, 947 raw
Sequence
>LE_HBa0223M05_SP6_401122 (raw untrimmed)
GTATATGCGGGAATTTCTCTATTTCTGAGTGATCTCTGTAGAAGTTCACTCCCATAAGAACCCCCTGCATCGTATCAAACACTGGCTTTGTTATTATCAT
CTTGCCCCCAATAGAAGTACTCTTTCAATGATTGATTGCCAATGTAGGGGTTTGAGACACTTCTCAAAATGAGGTGAACCTATCCCAGGAACTGCTCACT
GACTCCCCTGGAAATGCCACAAAGTTGTTCACCCTATATTTATGGTTTTTCTTTTAAGAAACCAGGTAATACCTTTCTAGGAACACATCCCTCAATTTCT
CCCAATTATAGATTGAATTATAGGGCAACTCAGTAAATTAAATTATGGCCTCCCCCGTCAGTGAAAGAGGGAACACCCTTAATCCAATTACATCCATGTC
TAAGGCTGTCCTCTCTACACAACTCTTACACACCGACCTTAGTTTGTAGATGTGAGCATGTAAATCCTCGGATGGTTGCCCCAAAAACAAACCTCTAGCG
GTGAGCATCTGTATAAAGCTATTAGTTACCATGAAAGTATGACCATGTGGTAGAGGAGGTTAACAATGGGCCTATCAGAGTCAATAATGTTAGCATTTCC
CCTATATTACTCTTGAGGGGGTTGGGCAGGAGGTTGCCTTCTCGGATTACCTTCACTAGGGTTGTCAACAATTACTTGATTATGAGCATCAATCCGCGGT
GGATGTTGAGGCTTGATTTTATCATTATATAAGCCAAATTGTTTTGACTGTTGATTCTGCAAAGTGTGCGGGTTATCTCTGGATCAAGTGGAAATATTGG
TTCTTCTAAACTCCGTGTACCTGTCCAAAACCAAAGCTTAACCCGCCGACCGAAAAAATTAAAAACCAAAAAGTAAAATCCGGAAATTTTTTGCTTAAAA
TTTGAAAAAGGGGCTTAAAATTAATCTGAAAACCCCTTTTCCCCCCA
>LE_HBa0223M05_SP6_401122 (trimmed for quality and cloning vector)
TCTCTATTTCTGAGTGATCTCTGTAGAAGTTCACTCCCATAAGAACCCCCTGCATCGTATCAAACACTGGCTTTGTTATTATCATCTTGCCCCCAATAGA
AGTACTCTTTCAATGATTGATTGCCAATGTAGGGGTTTGAGACACTTCTCAAAATGAGGTGAACCTATCCCAGGAACTGCTCACTGACTCCCCTGGAAAT
GCCACAAAGTTGTTCACCCTATATTTATGGTTTTTCTTTTAAGAAACCAGGTAATACCTTTCTAGGAACACATCCCTCAATTTCTCCCAATTATAGATTG
AATTATAGGGCAACTCAGTAAATTAAATTATGGCCTCCCCCGTCAGTGAAAGAGGGAACACCCTTAATCCAATTACATCCATGTCTAAGGCTGTCCTCTC
TACACAACTCTTACACACCGACCTTAGTTTGTAGATGTGAGCATGTAAATCCTCGGATGGTTGCCCCAAAAACAAACCTCTAGCGGTGAGCATCTGTATA
AAGCTATTAGTTACCATGAAAGTATGACCATGTGGTAGAGGAGGTTAACAATGGGCCTATCAGAGTCAATAATGTTAGCATTTCCCCTATATTACTCTTG
AGGGGGTTGGGCAGGAGGTTGCCTTCTCGGATTACCTTCACTAGGGTTGTCAACAATTACTTGATTATGAGCATCAATCCGCGGTGGATGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970367
Expected error %
0.294303
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223M05
Clone
Clone name
hba-223m5
LE_HBa0223M05
P223M05
Clone type
BAC
Contamination
none
Estimated length
100,993
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found