Clone Read LE_HBa0242G04_SP6_403970

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0242G04_SP6_403970
Primer
SP6
ID from Seq. Facility
LE_HBa_242_G04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
665 trimmed for vector and quality, 781 raw
Sequence
>LE_HBa0242G04_SP6_403970 (raw untrimmed)
CTCCTTTAACCTCTGCTTTGTGACCTCAGCAGGTACATTTTCACCTCAAAGTTTTTTCTTTTTCTTCTTCTATTCTTCATCTTCAATATGCAGTCAGCAC
AGCTGTGTGCAGTGTTCAGAGCCTATGTCTTTTATGCTCTAGCTTTTAATTTCTGGAGCTACTGACTATTGCAATCTGCCTGTACTTTTTAAAAAGAAAA
ACAAAAAAGACTAATCCTTCTGTATTTATGGCTTCCCTACTCAATTTAGTTTTATACTAAACAATATAGTATTTCTTTGTCCATAAATAGTTATTTCAAT
GACGTATGATCTAAGCCAAAAAAAGGACATTCGATGGAATTATGGTATGAAATGACCAACAAAAATTCAGTTATATGTATGTTCTGTAAAGTTACTTATA
ATGGTGGTATTACTCGACACAAGCACTTTTGATGGGTGGAAACAGAAAGGTAAAACAATGGTTGTCGGACAGAAGTTACAGAAAAATAAGGGCATATGTG
GAAACTGAAATCGCAAGTTATCCGAAATATCAGACCAAGAAGAAAATGTGGTTAATATTGATGATGATGATGATTTGGATAAATATGGTGAAATGATGCC
TCCCTCGAAAACTCAAAAGATGTCTTCTAGTGTAAGTGCATCATCCACAGAGCAGAACGTGACGAATTGTGCTCTCAATCTCTATTTTCAGAAAAATCAC
ACAAAAGGAGGCTTTTAAAAGGGAGTAGAATTTGATCAAACCTAGAAAATTCTAAGGGAAGCCGTTGTAAGTGCTTTTGCN
>LE_HBa0242G04_SP6_403970 (trimmed for quality and cloning vector)
TCTGCTTTGTGACCTCAGCAGGTACATTTTCACCTCAAAGTTTTTTCTTTTTCTTCTTCTATTCTTCATCTTCAATATGCAGTCAGCACAGCTGTGTGCA
GTGTTCAGAGCCTATGTCTTTTATGCTCTAGCTTTTAATTTCTGGAGCTACTGACTATTGCAATCTGCCTGTACTTTTTAAAAAGAAAAACAAAAAAGAC
TAATCCTTCTGTATTTATGGCTTCCCTACTCAATTTAGTTTTATACTAAACAATATAGTATTTCTTTGTCCATAAATAGTTATTTCAATGACGTATGATC
TAAGCCAAAAAAAGGACATTCGATGGAATTATGGTATGAAATGACCAACAAAAATTCAGTTATATGTATGTTCTGTAAAGTTACTTATAATGGTGGTATT
ACTCGACACAAGCACTTTTGATGGGTGGAAACAGAAAGGTAAAACAATGGTTGTCGGACAGAAGTTACAGAAAAATAAGGGCATATGTGGAAACTGAAAT
CGCAAGTTATCCGAAATATCAGACCAAGAAGAAAATGTGGTTAATATTGATGATGATGATGATTTGGATAAATATGGTGAAATGATGCCTCCCTCGAAAA
CTCAAAAGATGTCTTCTAGTGTAAGTGCATCATCCACAGAGCAGAACGTGACGAATTGTGCTCTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.956053
Expected error %
0.393368
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0242G04
Clone
Clone name
hba-242g4
LE_HBa0242G04
C12HBa0242G04
P242G04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found