Clone Read LE_HBa0227N21_SP6_404320

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0227N21_SP6_404320
Primer
SP6
ID from Seq. Facility
LE_HBa_227_N21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
563 trimmed for vector and quality, 950 raw
Sequence
>LE_HBa0227N21_SP6_404320 (raw untrimmed)
NNCCGCTGCTCCATNCNANATNTGNAATGGAAGAGAGCACTGGGATAGGTACCAGGTCCTTACATTTGTGAGGATCATAAAAAACATCTGGAATATAAAA
AGGTTGGAAGACAACAAAGGATTGCACCTGTTGTAACAATGAATGTCGACCCCTGTCCTACTAAATAGGAGAAGATGTTGACTTTGAGAAATTGAAATCA
CTCTTTAAATCAGATAAGCTAAGTACATTACTTCCAATCGATATCCAGCTCCATTGATACCAAATTAAACTAATCAAAAGGGTGTTGCATAACATATTGC
TAAGACTAAAATCCTTTAGGGCGTTTTCTTTGTCATAATATGAGATTGTTGAGTTGCCAAATGACTTGTGTATAAAGTTATAGCTCCTGAGATTTTTGAA
TATTCTCAGAAAATATTACAAGGTTGCCAAATTTCTTTTGTGAATTGTATAACTTAAAGACCCTTCTCCTGTCATCTTGTGCTGATCTTGAGGAGTTACT
GCTGTAGATGGAGAGGTTGATTAACTTGTGTCATCTTGACATAAGCAACACTTTTCTCTTGAAGATGCCGCTACATCTGACCAAGTTAAAAAGTTTCCAA
GTGTTAGTGGGAGCCAAGTTACTTCCAGATGGCTGGAGAATGGAAGATTTTGTTGAAGCACATAACTTGTATGGATCTTATCATTTGTATAGTTGCCAAA
TGTGGTTAATAGCAAGGGAAGTTGTGTCCTAACAGATTAGGGGAGAAAACTCATGTTGACCAATTTTCCTTTGGGAGGGAAGTGAAAGTTATAAATGTGC
CACTTCCCAAACCTGAAAGAAATCTTATTTGAATGAGCCCACCCCCCCCATCAAAACCATAACGGAAGTTCCTTATTCCCCGGAATTATGAGGGAACATT
TAATTTTTAAATTGCCTTACCTAACCCCTTTTGTTTCTTTACCCCAATTA
>LE_HBa0227N21_SP6_404320 (trimmed for quality and cloning vector)
GTCCTTACATTTGTGAGGATCATAAAAAACATCTGGAATATAAAAAGGTTGGAAGACAACAAAGGATTGCACCTGTTGTAACAATGAATGTCGACCCCTG
TCCTACTAAATAGGAGAAGATGTTGACTTTGAGAAATTGAAATCACTCTTTAAATCAGATAAGCTAAGTACATTACTTCCAATCGATATCCAGCTCCATT
GATACCAAATTAAACTAATCAAAAGGGTGTTGCATAACATATTGCTAAGACTAAAATCCTTTAGGGCGTTTTCTTTGTCATAATATGAGATTGTTGAGTT
GCCAAATGACTTGTGTATAAAGTTATAGCTCCTGAGATTTTTGAATATTCTCAGAAAATATTACAAGGTTGCCAAATTTCTTTTGTGAATTGTATAACTT
AAAGACCCTTCTCCTGTCATCTTGTGCTGATCTTGAGGAGTTACTGCTGTAGATGGAGAGGTTGATTAACTTGTGTCATCTTGACATAAGCAACACTTTT
CTCTTGAAGATGCCGCTACATCTGACCAAGTTAAAAAGTTTCCAAGTGTTAGTGGGAGCCAAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950427
Expected error %
0.628145
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0227N21
Clone
Clone name
hba-227n21
LE_HBa0227N21
P227N21
Clone type
BAC
Contamination
none
Estimated length
148,279
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found