Clone Read LE_HBa0118E03_SP6_40516

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0118E03_SP6_40516
Primer
SP6
ID from Seq. Facility
LE_HBa_118_E03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
812 trimmed for vector and quality, 894 raw
Genbank Accession
Sequence
>LE_HBa0118E03_SP6_40516 (raw untrimmed)
GGGCAGCATGAAACAGATAATCTGTTTTGTGCGCAGAAAAAGTAAAAGGGAGGGAGACCAACAATGTGAAGCTCGACTCAGGAGACTTGGAAGGGAATTT
GGTTGCTGCATCTTACCTAGGAAAATGTATGACATTCCATTTTTTTACGGTTATCTCTCATGGATAATACTTGTTTAGTAACAAGAGAATCTTACGTCGT
TGAATTATAAAAGATTGTTTGTTGTTGTGTTTCTCTCAGATTCCACAGCCTCTGAGATGACAGTACTTGGCAAGAAAAAGATGTTACCCTCGGAGACGCA
GAATCGGGATATGTACTTCAATCCACACTTCACTGTTTCTATGCTGCCTGCTTATGTCTCCAGAAACTTCCAATTGGTAAGTTATCAAGTCAAGAGATGT
TGCATTCACCGTCTTTTGGTAGATGTCCTGAGGGGTCAAGTGCACCTTTTCTTTTTGTTTCTTTTCTGTTAAAGGATAGAAATCAATAAAAGAGTAACAA
TTTGCAGGAAATACCTGCTGACTTTTTCAAGAAACGTGTGAATGAAGAGGAAACCATTGTAAATCTACGAGTTTCTAATGGGAGAAGTTGGCGTGCAAAG
TTGTTTGATATTCAATCAAATTGTCCAAAGATGGAATCATCAGGTTGGAGGGACTTTGTGATCGACAACAATTTAAAAGAGCATGATACTTGTGTCTTTG
AGCTGAATGACGGCATTGAGCCAATGCTACTGGATGTGACAATTTTCCGAGCCACAACTCCCGTTTCCTGAAAGATAGTCAAGTCACCCATTTTGCAAGC
ACTTTAGCTTTCTATCCATCTTGTGTATTTTGGTGCCCTCTCCTTATATTTGCTACTATTTCCTAAACGTTGTACTAACAACTGTTTAAAACTT
>LE_HBa0118E03_SP6_40516 (trimmed for quality and cloning vector)
AATCTGTTTTGTGCGCAGAAAAAGTAAAAGGGAGGGAGACCAACAATGTGAAGCTCGACTCAGGAGACTTGGAAGGGAATTTGGTTGCTGCATCTTACCT
AGGAAAATGTATGACATTCCATTTTTTTACGGTTATCTCTCATGGATAATACTTGTTTAGTAACAAGAGAATCTTACGTCGTTGAATTATAAAAGATTGT
TTGTTGTTGTGTTTCTCTCAGATTCCACAGCCTCTGAGATGACAGTACTTGGCAAGAAAAAGATGTTACCCTCGGAGACGCAGAATCGGGATATGTACTT
CAATCCACACTTCACTGTTTCTATGCTGCCTGCTTATGTCTCCAGAAACTTCCAATTGGTAAGTTATCAAGTCAAGAGATGTTGCATTCACCGTCTTTTG
GTAGATGTCCTGAGGGGTCAAGTGCACCTTTTCTTTTTGTTTCTTTTCTGTTAAAGGATAGAAATCAATAAAAGAGTAACAATTTGCAGGAAATACCTGC
TGACTTTTTCAAGAAACGTGTGAATGAAGAGGAAACCATTGTAAATCTACGAGTTTCTAATGGGAGAAGTTGGCGTGCAAAGTTGTTTGATATTCAATCA
AATTGTCCAAAGATGGAATCATCAGGTTGGAGGGACTTTGTGATCGACAACAATTTAAAAGAGCATGATACTTGTGTCTTTGAGCTGAATGACGGCATTG
AGCCAATGCTACTGGATGTGACAATTTTCCGAGCCACAACTCCCGTTTCCTGAAAGATAGTCAAGTCACCCATTTTGCAAGCACTTTAGCTTTCTATCCA
TCTTGTGTATTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963475
Expected error %
0.387286
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0118E03
Clone
Clone name
hba-118e3
LE_HBa0118E03
C12HBa0118E03
P118E03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found