Clone Read LE_HBa0230K14_T7_405573

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0230K14_T7_405573
Primer
T7
ID from Seq. Facility
LE_HBa_230_K14-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 2576 raw
Sequence
>LE_HBa0230K14_T7_405573 (raw untrimmed)
TCTGTCTAGTCGATCTGACAGCACACCGACTATACTAGCGCGAAATAAGACGTGCGCCGATATAGCGACTACGCGAACACTGCTATCTGCTAGTGTGCAC
ATATCACTGCNANACCGCCCGTACACTATNTNCTCTTACNCTACGCGCCTGCGACGGTCGCTCCCACGCTAACTGCACTGTCNAGATACTTAGATGTACC
TGACGCCNATCACACGCGATGCGACTGAGTAGTGCAGACCANGATCGCACTGCTACTTAGTTGTCGCAATGCAACTCTGCCACGACGCTGAGCGCTAGCA
GTGCTATGCATGCGACTTGTGCCTAGGCCTCGTGTACTACCACTGCTACATATGCCACGGCTCACGGGACGCGAGCGATGTACGTAACCTCGTGAGGTAC
ACCTCCANGCGCAACAATCACGANCGATATCATCGCGCTCAACCACGCTGCTCTACACTATCGCGGCGTCNTATATGTAGACGCCGAGTGCATTAGTCGG
TAGGCGACTCTCATCATGCACCATCTCGCCNGGCGCATGCACANCGCGCATGGTATCCTAGAGTGCGACCTACCGCTGTACTCCTCGCACTGCCTATAAT
TATTAGGCNCGACACTGCACCATGTATGCTGACTCACGCTGTCGTACTACCATGCCGCATCTTCTGATGTCTCTCTAGATTTACTGTCACAAGCGTCTCC
AGACACCACCGCCCGCATAGCAGCAGCTCATGCGCCGTTCATTCTCTCGCCTGTCGTTATCACTGTTTCTCACTGCACGTGCCGCGAGTGTAGATGTCAT
ATCGCGAAACACGTGNCATGGCGACGCGTGTGTGACAAANCGCGCGCGTCACGTGATCGGACAGACACCGGGTGTACGCCTAGGTACTACCTGAACTGAA
TGTGTGATCCGTCACGCTGCGCAAGACGCCAGCCACAGTCAGAGCGATCGATGCAACGACGGGCGACGTAGCTGCGTCATCGTCTATCTGTGACCCGATC
TGCGCGGATCTGTCTCTCCTACAAGCGTTACATCACCTCAACGATGGCGTAGTCAATCTGTTGCTGACTAGTGATAGCAGCTGCATGCCCTGGCTGCGAT
CTGCATCTCAGCCTCTGGACTCCTTACTGTGTACCTGAANCTCTCATCGCCCCTCCTGCACTGCACGGCCTGATGGTTCGACACGCACTCTTGTACGATA
TCGAGGAACGAACCAGCTGCTCGTCACGTATACGGATATCGCTCATCGTCACACGGCTAGACTTCTCGTCTCATCTGAGCATAGACGCGATCTCCGTAGT
ACACTGACCGCTAGACTATACGTTNCATATCGGCCGATGCCTGACCAACTCGCATGAGGGCCGTGACGCTAATATAGTCGTCGGCTCGCGTTACGACAAT
ACGGGTACAGTACCATGCTCGTCGATCACACACTAACCACGACTGTACGCGCTAGGTCGGCGTATGACACNGTATACCTGAACGACGCACGCAATGTCTC
GGTCTCTCGACCTGGTGACACGAGCCGGCATATGACTCTGTCCATACGCCGCGTCAGAGTGTGCATGTCATGGCGGCTGATGTCTTGTCTCAGATGAGCA
TCCGCCACATCTCGTGTGCCTACGTTCCTGTCGACCTCTGTAGAGCCTCTCTCCGTTCCTGTNCTAACGCAGCAGCTATCCACTGGATACCGCTACGATC
AGCGACTAGTCTGCCCGGACGTCACACATGCGAGGCTGCGCAACTTACATCNACTGTGGCACTTACTCGACGGTCGACCCATCGCTGCGTACGTGAGAGC
GCGCGCGACCTATGTCGCTCTCGCTGCGATACTGCCTNCGCGCACAGAGTGTCGACTGCACTGCTCTACTCTACCTGCTAGACAGAGATGTGCTGCATNC
GNGCTGTGTCTGTGTGTACTATCACTGATTATCAGCACGGATAATATCTACTGCTGAGATGTCACTAAACTCCACTCAACGTCTGCNCATACTTGTCAGT
GTACTGCTCTGCTCAACTCATGCTCGCGTGATCAGCTNCCTCCACACGCTGCCTGTACCCTGTGCACATGTATCTACGCTCTNGNGCAGCTGCACTGTAC
GCATTGTCTCAACTGCAGAAGTACGACTCATAATCATCGTATGCTAACTCGCGCTTCGACTCGCTNTGCGCATGCGTCATACTANCCGAGCTGCGTCTGC
ACGGTCGCACTATCACGCTGCACGCAGGCCGCTCCGCACCGCATATGACTTGACGCTGATATGCCGCGCTCGTGCATCGCCGTACGANGCCGCGAACGGC
GACGCTTCTAGATGACTGNCTGCGACTAACAANCTCTCATGACTGACCGCAGCACTACGTGTACTGGTCTTCCAGACTGAGCGCGTAGTCAGACGTGCCC
ACGATGTCTCGACTGATAATACGCATATGCTGTGCANGTCTCGACACCTACTGCATATAGCTAATGCGACTCACGTCGCATTCACTGACCACTGCCGCAC
NCATCACGCACACTATGTGGCGACGAACTGCTCTCCGCGACGCGACATCTCTTGCGCAGTTCTGACTCCGCTCTGG
>LE_HBa0230K14_T7_405573 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0230K14
Clone
Clone name
hba-230k14
LE_HBa0230K14
P230K14
Clone type
BAC
Contamination
none
Estimated length
106,964
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found