Clone Read LE_HBa0246H13_SP6_405607

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246H13_SP6_405607
Primer
SP6
ID from Seq. Facility
LE_HBa_246_H13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1387 raw
Sequence
>LE_HBa0246H13_SP6_405607 (raw untrimmed)
AATGGTGTTTTATGAGAATTTTTTAATTTGTTGTGATGAGTTTATGAAGACTCTGTATTGTAAGATTAGCTTATNTGCCTCCCTTTATTATGGGAGGAAG
TAGTAGATGTTAGATTTTGTTAATATTATATTATGGGGGTACTCCCTTATTATTTGAAGAGATTATTAGAATCATAGTTATAAATATTTATTCGGTAAAA
TAATATTACATGTATTGTAATATTATAGGAGGGATGATATTAATAAATAATTACTCTTAATATGAGATATAGTGACGTGTCCAATAATATCATATGAATA
AATAGATTGGTTAGTTAGATGGTGTATTCGTTATGTATTAGTAATTGGATAGAGGGTTTTTACAATAATAGTCTTGAATAAGTAAATAATAATATTTCTG
TTTAGAGTGTAATAGTTAATATTTATATGAGTAGTTGTTAAATACTTTATTATGAATGAAGGTGAACTATATATATTATATTTGGTTATATGATTTATAT
TAAATAAATTTAGTATCATAGTAATTTGTTATATTGAATAATAGATTTTTTATTAAATTGTGGACATTAAATAATATATATTATAATTCTGGGGTGTTTA
TACTGTAAAATTTATATGAGAGTGTTATATGAAAAATTCATATAATATTATTATATAAATAATAATAAAAACTATTGTGTTATATTTAGGGTGAGATATA
ATAAAAGTAGATGAGCACGATATATATTATTTGAAAATGAAGGGTGGGGGGTGTATATTATTTAGATATCAATTTATTATTTTTTAAGTTATAATATTTT
GTATAATTATTATATGTTAGGGAAAGATGTTATGTAAATGTAATGTTATATTATGGAAAAATAATATTTAATTGATATTATATTATATAGTTATATTATT
TTGTTGAAGTAAGTATTATATAATAGTAAATTAAATAATATTGTAATTAATTGATGTAGTATTAGGATATAGATCATATGTTATCTTTTATTCATGAGTG
ATAATGTTGATTTATATTATTAGTGATGTAATTTCTTTATAATAATGAATTATTGTTGTTATAAATATTGGTTGTATAGGTATTATGTATTTATTGATAT
GTTAATAATATATATCATGTTTTTTTCGAATGTTATGTTTTAATATATATGATATGAGTGAGTTTGACGTGATGATTACTTGTGTTATATATTTGTTCTG
GTTTATAATTATATTATTGATATTTGTATT
AATATTTAAACATAATATAATATTACAATTGAAATATGTTTGAATGTTTTTGTTATTATATTATATTTAA
TATATGTAATACTTATTAATATCGTTGTATTATAATGGATAGTTAGTTTTTGAATTTATGATGTGATGTGAGTATTTTTATGATTTA
>LE_HBa0246H13_SP6_405607 (trimmed for quality and cloning vector)
AATA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.875981
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246H13
Clone
Clone name
hba-246h13
LE_HBa0246H13
P246H13
Clone type
BAC
Contamination
none
Estimated length
83,000
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found