Clone Read LE_HBa0246H13_T7_405610

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246H13_T7_405610
Primer
T7
ID from Seq. Facility
LE_HBa_246_H13-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1444 raw
Sequence
>LE_HBa0246H13_T7_405610 (raw untrimmed)
TTTCAATAAAAAGAGGGGGNNNNNNNNNNNATNNNNNNNNNAGAAAAGANNAAAAAANNAAGAAGACGAACAATAAAAGAGAGAAGGGGNANNNNGNAAA
AAAAAAAAAGAGAGAAAAAAAAANAAAAAAAAGANGAAGGAAAAGAAAAAAAGAAGAGGGGAAAGAAGAGAAAAGAAGGAANAGAGAGGAAGATTTTTTG
AAGAAGAGGGAAGAAGAGAAAAAAAGNAAAAAGAGAGAAGAAAAGAGAGAAGAAGGGAGAGGAGAAGGGAAAGAAAAAGGAAAAGAANAAGAAAAGAAGG
AAAGAAAAAGAAGAAGGGAAGAAAAGAAGGAAAAGAAAAAAAGGAAAAGAAAAGAAAAAGAGAAAGAGAGAAAAGAAAAAGAAGAAAAAAAAGAGAAGAA
AAAGAGAGAAAAAAGAAAAAAAAAAGAAAGAAGAAAGGAAGAAGGAGAGAAAGGAAAAAGAAAAGAGAAAAGAGAGGGAGAGAGAAAAGAAGAAAAGGGA
AAGAAAGGGAAAAAGGAAA
AAAGAGAGAAAAGGAAAGAAAAGAAAAGAAAAGAAGAAAAGAGAAAAATTTTTGTATTATAGAAGGAGAGATAAATAATAA
AGAAAGTGAGAGGAGAAATATGAATGGAAGAAGAGGGAATGGAAAGGAAGAAGAAGAGAAAAAAAGAATAGAGATAGAAGAAAAAAGGAAAGAGAATAAA
GTGAGAATAAGAGAGAGAAAAGAGAAGAGAGTAATAATAAGAGAGAGAAAAAGAAGTAGGGAGAAGGAGAATGAAGGATAGGAATGGAAAAAGAGAAAAA
AAAGAGAAGAAAGAAAGGTAAAAGAGGGAGAAAGAAAAAAGAATATAAATGAGAAGAAAAAAAAGAGAAGGAAGGGAAAAGAAAGAGAGAATAGGAGAAG
AAGAAAAAAGAGGGAAGAAAAAGTGAAAAAAAGGAAAGAGTATAAAGAAGATGAGAAGAGAAGATAAAGATATAAAGAGAGAGAAGGAAATAAAAAATAG
AATGTAGATAGATAAAGAGAGGAAAGAAAAAGATAAAAAGAGAGAAGAGAGAAAGAAAAGAGGAGTAGGATAAATAAGAGAAAATATATATAAGAAATAA
ATATGAGAAATGAAAAAAAGTTAATAGAGAAGGAGAAGAAAAAAGAAGAAGAAAGATAAAAGGAATAGGAAGATAAAAGAGAAGAAAGATAAAGAAAAAG
AAGTGTAAAGAGAAATGATAAAAGTATAAAGAGAAAGAAAAATGAAAAAGTGATAAGAAATATAAGAAGAAAATAAGAGAGTATGAAATGAGATTAAAAA
GTAGAAGAAATATATAGAGAAGAAAATTAAGAAAAAATAAAAGAAAATTAAGTGAAATGAAGATGAGGAAGAGAAAAAGAAAGTATATAGAAAAAGATGG
GAAAAGGAGAAGAAAAATGAATAGTGAGAGAAATAGGAAGAGAA
>LE_HBa0246H13_T7_405610 (trimmed for quality and cloning vector)
AAAG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.17313
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246H13
Clone
Clone name
hba-246h13
LE_HBa0246H13
P246H13
Clone type
BAC
Contamination
none
Estimated length
83,000
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found