Clone Read LE_HBa0230M03_T7_405723

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0230M03_T7_405723
Primer
T7
ID from Seq. Facility
LE_HBa_230_M03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1426 raw
Sequence
>LE_HBa0230M03_T7_405723 (raw untrimmed)
TCAGTTCTACTCTTGCCGGCTATGACAAGTCGTTACTTAATCCTGTTTAATAAAAATATGCCCCTCTCTATAAGTCAACATACATGACTAAATTGAGAAA
ACATCTATTTTTGTAAAGGATACACCCTCTTGTCTTATATATTTGATACAATGCTTAGATAAGGTCACTTTATAACAATTCACTGTACTTACTACCACAA
CATCTCATGCTAGAGGCTATAGATCCGAAGTAGATCCATTCCTCTCTACTCCTAGTATTTTTCTCTCCACTAGAGAAAGAAGTTCTTAAATCTCTCACTA
TTACTCTACTCCATCTATGCACAATCAATACTGTAACAGCAACTATATTTTTCGTCCCCACTGTTATTGTGCATATACTTAGCTACTTATTCTTTCCATC
TATTCACACCCACAGTGGTTGAGATTGCATTCTACTTTCTATACCAATCTTAATTTATCTCTCGATAAACATTTCCTACTCACCTGTTTTATAGACTCTC
CTAAATACTACTGTCTTAGTAGATTTATCTCGCTGTATATTCTTATAGTACTGTTTTTCTACTCCTTTCCTTTACATCATCTCTACTACTATTTAGATAC
CAGATATCACTCTCTATAATACCATATCACCTTGATTATAGTATCGACCTACCTATACTT
TTTCCACGCGTCTTTTACCTAATGCATTTAATTTTATAAC
CTCCTAAGTCTCGTCCTGCAATGACTCTTAGAAATCGTGTATTAGATCATCACATACATATACATAAATATGCGTATAATGAGATCTATTCACATGCATA
TTGCTTGAGACGAGGGAGATAATGACTCCGACTCCATTCTACAATCCATGACATCCACATTGAAATAATAAACTTTCGTACTGTGAGGAGCTTAGATCGC
AACATCCACTACGTCACCTTTGCCATTATCTACCCATATATGTACTCACTATCTCTACGCCTGCCCCTCACAACATATAATACAATACCAATAGTGAGAA
TATTTCTACTATACTTCTTAATACTCTTACACACACATATATATCAATTGCCTCTCTATCATATTTATCTATCTCTTAATATGCATTACTAACATCTCTT
ATTTTATATCTTCCTTTAAATCTCACTCTCAAACATAATATAAGAGTCTTTCATCTCATACCTGACTTCTACTTCTTTCCTATATTAATTAGAGCTTGAT
ATCACGCACTGCTACTATGTGCTCTGCGACGACATTTTACAATGCTAGATTCGTAGACTCTATAATCCAGTCCATTCACTATTACCGTGTGGCTTACCAC
TACCTATCGCATCTAATATATTCATTTCTGCACCTTCATCTGAACACATTCTATACTCTGAATATTATTTCACCACACTCATCCTATGTTAGATTTGGGT
CACGTTCATCACTTGAGCACAATATG
>LE_HBa0230M03_T7_405723 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
5.31548
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0230M03
Clone
Clone name
hba-230m3
LE_HBa0230M03
P230M03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found