Clone Read LE_HBa0246L20_SP6_406009

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246L20_SP6_406009
Primer
SP6
ID from Seq. Facility
LE_HBa_246_L20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 869 raw
Sequence
>LE_HBa0246L20_SP6_406009 (raw untrimmed)
CCCCTTTAGTGCTGAATCTGCTTCCTTAGCGTAGGTTCCATCCCCTTGATGAGCAACGGGTTGTCATCACTCATCTGTCATGGAAAAGTATCTCATTAAA
TTGAGCAAAATACAAAGGTGATAAACATTGTTGAAACAATCAGAGAACACAACTCATAAACCTAAAGTAGAAGATACAGGACTCTAAAGGAAGATGGGGC
ATTACAAGACCCTTTAGGAAACTGTTTGAAGTATTCAGTACATGAATTGGACATTATATTATAAACTCTTGTATCGTGTGATTAAACCAGACCCATATCA
ATATTTACTTCACTGTACAACATAATTTGGACCTTATATTCTATTTAACCTAGCACTGTGAGTAGCACACTTCTAAGCACAATTCCATTCATTAAATTTC
ACATGGTTCCAACCTCTTGTATCTTATATTTTCTTTCAACCATGGCATATCATATTCATATTCATGACTAACCAATGCTCCTTAGCCAGAATGCAAAGTG
AAACTTCCTAACAGTCAGAAAGTTATGCTTTCTACTAGTGAGAAGAACAGCTGATGCACCTGGAGGAAACGTTCCAAACGTCCACTAGAATGCTCAGGGC
CCTGACCATCATAACCATGTGGCAAAAGCACAACCAATCCAGTCTGGCGCAACCATTTCGCTTCTCCACTGCTCACGAACTGGTCAAATATTACTTGAGC
TCCCTTAGCAAAATCACCCAATTGAGCTTCCCCAATTACCAACGAATTTGGATTTTCCATTGAATAACCCAATTCAAATCCCAAAACACCAAAATTTGAA
AGGGAACTGCCTTAAAATTCCAGAGCAAACAAAAGTTTTATGTTGGATCCTTAGGGCCCCTTATATTGA
>LE_HBa0246L20_SP6_406009 (trimmed for quality and cloning vector)
GAATCTGCTTCCTTAGCGTAGGTTCCATCCCCTTGATGAGCAACGGGTTGTCATCACTCATCTGTCATGGAAAAGTATCTCATTAAATTGAGCAAAATAC
AAAGGTGATAAACATTGTTGAAACAATCAGAGAACACAACTCATAAACCTAAAGTAGAAGATACAGGACTCTAAAGGAAGATGGGGCATTACAAGACCCT
TTAGGAAACTGTTTGAAGTATTCAGTACATGAATTGGACATTATATTATAAACTCTTGTATCGTGTGATTAAACCAGACCCATATCAATATTTACTTCAC
TGTACAACATAATTTGGACCTTATATTCTATTTAACCTAGCACTGTGAGTAGCACACTTCTAAGCACAATTCCATTCATTAAATTTCACATGGTTCCAAC
CTCTTGTATCTTATATTTTCTTTCAACCATGGCATATCATATTCATATTCATGACTAACCAATGCTCCTTAGCCAGAATGCAAAGTGAAACTTCCTAACA
GTCAGAAAGTTATGCTTTCTACTAGTGAGAAGAACAGCTGATGCACCTGGAGGAAACGTTCCAAACGTCCACTAGAATGCTCAGGGCCCTGACCATCATA
ACCATGTGGCAAAAGCACAACCAATCCAGTCTGGCGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962018
Expected error %
0.363285
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246L20
Clone
Clone name
hba-246l20
LE_HBa0246L20
P246L20
Clone type
BAC
Contamination
none
Estimated length
77,712
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found