Clone Read LE_HBa0247G02_SP6_407003

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0247G02_SP6_407003
Primer
SP6
ID from Seq. Facility
LE_HBa_247_G02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
11 trimmed for vector and quality, 1066 raw
Sequence
>LE_HBa0247G02_SP6_407003 (raw untrimmed)
AAAAAATTTTGTTTTTANGGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTNNAGGGGAGNAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGGGG
GGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTNNNNNNNNNNNNNNNNNNNNNNNNTTTTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGGGGGGGGNNNNNNNNNNNNNNTTTTTTTTTTTNNNNNNNNNNTTTNTNNNNNNNNNNNNNNNNN
NNNTTTTTTTTTTTTGGGGGGGGGNNNNNNNNTTTTTTTTTTTTTTNNNNNNNNNNNNGNGGGGGNGGTGGGTTTTTTTTTTTTTGGTGGTTGTGTTTTG
GTGGTTTTGTTTTTTTTTTGTTTGTTTTTTTTTTTTGTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTGTGTTGTTGGTGTGTTGTGTTTTTTTTTG
GTTTTTTTTGTTTTTTGTTGTGTGGTTTTTTTGNTTTTTTTTTTGGTTTTTTTGTTTTGGGTTTGTGTGTTGTTTTTGTGTTTTTTTTTTTTTGTGTTTT
GTGTTTTGTGTTTTTGGTTTTTTTTTTTTTTTTTTTTGTGNGGTGGGGGGGGGGGGGGGTTTTTTTT
TTTTTTTTTTTTTTGGGGGGGGNGGNTGGTGGG
GGTGGTGGTTTTTGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGTTTTGTTTTTTTTTTTT
>LE_HBa0247G02_SP6_407003 (trimmed for quality and cloning vector)
TTTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.94135
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0247G02
Clone
Clone name
hba-247g2
LE_HBa0247G02
C02HBa0247G02
P247G02
Clone type
BAC
Contamination
none
Estimated length
57,868
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found