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Clone Read LE_HBa0247P03_SP6_407752

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0247P03_SP6_407752
Primer
SP6
ID from Seq. Facility
LE_HBa_247_P03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
31 trimmed for vector and quality, 961 raw
Sequence
>LE_HBa0247P03_SP6_407752 (raw untrimmed)
ATATCCGATTGTCTCGATAAGTTTGATTGCTGGACCTTTATATGATTGGTATGAATGGATTGCCATTATCTTGGACACATGGTGAATTTTCCAAAGAGCA
TGAAGCATATTTTTTATAAAGTCCATGTTTCCTCACATTGACTTGCATTTTTATATGCTAAATGTGAATTTGACTTTATGAGATGAGATAATAAGCGTGG
TAATAGTCACTTGTGAGGTGAATTGTTTAGCCTTAAAATG
AAAACTTGAGTCTTTTTAAAATTAATTATGTTGAGTCTCTTGAAGACTATGTGACTTTTA
TGATTTGGAATACATAATTGTAGGCTCATTCTTAAAAAGTGAAAACATACTTTACTAAGTGTCCATGTGTGTGCCTATAATTTATGTTATCTTTCCAAAC
TGAAGCTTACTATAAAGGTGAGTATTATGTGAAAAGATGGAATTTGTGGGAAAAATTTCCAATTTTTTGTGAAGAACCTGGTGTGACTTACCACTTTGAC
CAATCTGCGAATCCAGTGATCTCCCTTGGAGACTCCCTAGAATATTCTAGCTTATTTTGGGCTAAACACTTTTCTTCCTTGAAACTTGGTTTGTTGGTGC
ACCTTTCCATTCCCTATGAAAGAATCCTGAACAATGCTTGGGTTTAAATTTAAAAATTTTCCCTTTAAAAAGAAAATTGTTTTTGTTCATTGCTAAAGGG
GGAATTTCCCCGAAACTAGTATGTTTTGTGAGTAAAAAGGAATTCCCCCTTTTGGGAACCCCTTAAACATTGGGATTCTTTTAAGATTAACCTTTAAGGG
CACTTAGTCTAAATAATGAAAAAATTTTCTTGATTTTATCAACTAAAAGTTTTTGTGGAATTTGAGTTATAAGTCACTCAAATAAATTTGGAGTTATTGG
CTTTGTATAATTACTTCGAAGTATGTTATTCAACTATTTCATCTTCAATTGTCTTGTGTAA
>LE_HBa0247P03_SP6_407752 (trimmed for quality and cloning vector)
AAAACTTGAGTCTTTTTAAAATTAATTATGT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.604938
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0247P03
Clone
Clone name
hba-247p3
LE_HBa0247P03
P247P03
Clone type
BAC
Contamination
none
Estimated length
109,596
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found