Clone Read LE_HBa0247P03_T7_407753

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0247P03_T7_407753
Primer
T7
ID from Seq. Facility
LE_HBa_247_P03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
118 trimmed for vector and quality, 1075 raw
Sequence
>LE_HBa0247P03_T7_407753 (raw untrimmed)
GGGTCTCTANATCGACTGCAGGCATGCAAGCTTCCTATGCGAGGAGACTATCTTTATATGTTTTAGTAAGTTAGAGGTCTATATAAACCTCAATATGTAA
GAAAAGTTTTATTTTTTTAAAAATTTAACCGTTGAAGGTTCAATTCTAAGATGGTAGTCTTAGTCCTCTCCGAGGATGACTACGCCGATTGCGTCTTGGG
GGTTCTCCCTTTTAATGACAAACTTGGTATCAGAGTATGAGGTTTAGTAACCTTAGGATTTTTGTATCCCTAAAACCCCTCCCTATAGATTCCTATTGAT
GATTGTGGAGTGCGCCCCACTAAAGAATGATCGAATATTCCATGCTTAGGAAATTCCCCCCCTTCCTTGGATTCCCATGTCCTATTCTCCCCGAGGTTTT
AAACCTAGGTGTTCCTTTTTCACACAAACCTCTTTGTTCTGGGGTTAAAGGGTGGACCTTCCCTGCAAAGGAGCCTGCCCTATAAAAATGGGAGGGAAAA
ATTTTTGTCTAATTCCTGAAAAGTTTTCCCCTCCCCACGAATAACCCCAGGCCCTCCTCCCCAGAGGAAACCCTCGGGGCCTCTCTTCTATCAAACACAA
ACCTCCCGGGCCATTTCCTCCCCCCCCTTCTGATGTGATATGAAAAGCATTAAGTGTCCCGCCTTTTTGGTTACTTTTTTTGCTTCAATTCACACTTCCT
CTCTCCTCTTCCTCCTCGCCCGCTGTCCCCTCTTCCTAACCACCTTCTATTTATGTGGTGCTCCCACGTCACTTCTAGCCCTGTCTTGGCTCTTCCTCTT
ACTATCTCTTCCTTTTGTTTTGCTCCCTCCCCTCTCTTTCCTTTACGTGCTAGCCTCTCCCGCTATCAAAATCCCCCCTTCGTCTACGTGTTCGTTCCTT
CTTCTCTTCGTCCTTTTTCATCTCCTCTCTATCTCTTCTTGATACATCCTCCCTCGTCTTTTCTTTCTCCTCTCCTTGTCCTTTCTCTCCCCTCTTCCCG
TTTCCTTATCTTCCTGCTCACCTCTCTCTACCCTTTCCCCACCTTTCTCGCCTCTGCTCCTCTCATTTGCTTCTC
>LE_HBa0247P03_T7_407753 (trimmed for quality and cloning vector)
CATGCAAGCTTCCTATGCGAGGAGACTATCTTTATATGTTTTAGTAAGTTAGAGGTCTATATAAACCTCAATATGTAAGAAAAGTTTTATTTTTTTAAAA
ATTTAACCGTTGAAGGTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.897471
Expected error %
0.623227
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0247P03
Clone
Clone name
hba-247p3
LE_HBa0247P03
P247P03
Clone type
BAC
Contamination
none
Estimated length
109,596
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found