Clone Read LE_HBa0118K05_SP6_40808

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0118K05_SP6_40808
Primer
SP6
ID from Seq. Facility
LE_HBa_118_K05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
589 trimmed for vector and quality, 929 raw
Genbank Accession
Sequence
>LE_HBa0118K05_SP6_40808 (raw untrimmed)
GCGGCAGCGATTGTGTGGAAATCAATAATGATGAACTCTTGATATAATTTTAGAGATTTAAATTTTTTGAATAAAGCCCGATTTTGTGAAATCTTTTGAT
CTTTTTGTCCTCTTTTTGCCTTTTTAGAATTTTTTGTCTTTTAGTTCCTCTTTTTATTGTGTTTTTCAGTAAAAATTAGTGAAATATGAACAAAAATTGA
TTTTAGGATAGTTATTTAAATATAAATTTCAAATTATAAGAAGAATAAAAAAAATGCAAAAGGAGGATGATGAATATTGTCAGAGAAAGAGACGAAGACG
CAAAAGAATAAAAAGAAGAAGAGAAGGAAGAGGGAAAACCGGAAAAGAGATGGAAAAAAAAAAGAGGCGAACAATGTTCAATTTTCTTACTTTGAAAATA
AATGCTACATTTAGTTATTTTTTTTATTTTGCCATAAATGATAAATATTTTTATAATATACCATATTTATGTGATTTCATCTAAATCTATCAAATGTCCA
AAGTGGACTATTTTGGGCCCAAAAGTCAGATTATGTTCACCTGGACTGACTTTGGGCCTTCAATTGCTGATCACTTTGGGCTTTGGCCCATCTTCGCTCA
TTTATCAATTGTATTTTATTTTTTTTCATTGTATTGTTAGGTAGGGAATTGTATGCCAGTGAATATCGTCTGCTTTTTTCTGTATATATTATGTATACAA
ATTTATATAAGGAAAAATTAAGCGGCTTAATAATCTTAATCTATTTTATTACTCATCTTAGTTATAATTTGCTATATTTTTTTTCTTATTACTTACATTA
TACCATAATGACCAGGAACTGATTTTAGGTGTGGTAAATTCTTCACTTTCGTTATTGCTAATTCACTGCAATACATACAATTTTCTGTTCATGTCTCTTT
TCTCTAATTAATCATCCTTCTCATCCTGC
>LE_HBa0118K05_SP6_40808 (trimmed for quality and cloning vector)
ATAATTTTAGAGATTTAAATTTTTTGAATAAAGCCCGATTTTGTGAAATCTTTTGATCTTTTTGTCCTCTTTTTGCCTTTTTAGAATTTTTTGTCTTTTA
GTTCCTCTTTTTATTGTGTTTTTCAGTAAAAATTAGTGAAATATGAACAAAAATTGATTTTAGGATAGTTATTTAAATATAAATTTCAAATTATAAGAAG
AATAAAAAAAATGCAAAAGGAGGATGATGAATATTGTCAGAGAAAGAGACGAAGACGCAAAAGAATAAAAAGAAGAAGAGAAGGAAGAGGGAAAACCGGA
AAAGAGATGGAAAAAAAAAAGAGGCGAACAATGTTCAATTTTCTTACTTTGAAAATAAATGCTACATTTAGTTATTTTTTTTATTTTGCCATAAATGATA
AATATTTTTATAATATACCATATTTATGTGATTTCATCTAAATCTATCAAATGTCCAAAGTGGACTATTTTGGGCCCAAAAGTCAGATTATGTTCACCTG
GACTGACTTTGGGCCTTCAATTGCTGATCACTTTGGGCTTTGGCCCATCTTCGCTCATTTATCAATTGTATTTTATTTTTTTTCATTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.894183
Expected error %
1.01837
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0118K05
Clone
Clone name
hba-118k5
LE_HBa0118K05
P118K05
Clone type
BAC
Contamination
none
Estimated length
107,607
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found